Chemical crosslinking enhances RNA immunoprecipitation for efficient identification of binding sites of proteins that photo-crosslink poorly with RNA

por Patton, Robert D., Sanjeev, Manu, Woodward, Lauren A., Mabin, Justin W., Bundschuh, Ralf, Singh, Guramrit
Publicado 2020

Mammalian UPF3A and UPF3B can activate nonsense‐mediated mRNA decay independently of their exon junction complex binding

por Yi, Zhongxia, Arvola, René M, Myers, Sean, Dilsavor, Corinne N, Abu Alhasan, Rabab, Carter, Bayley N, Patton, Robert D, Bundschuh, Ralf, Singh, Guramrit
Publicado 2022

Zebrafish rbm8a and magoh mutants reveal EJC developmental functions and new 3′UTR intron-containing NMD targets

por Gangras, Pooja, Gallagher, Thomas L., Parthun, Michael A., Yi, Zhongxia, Patton, Robert D., Tietz, Kiel T., Deans, Natalie C., Bundschuh, Ralf, Amacher, Sharon L., Singh, Guramrit
Publicado 2020

A framework for clinical cancer subtyping from nucleosome profiling of cell-free DNA

por Doebley, Anna-Lisa, Ko, Minjeong, Liao, Hanna, Cruikshank, A. Eden, Santos, Katheryn, Kikawa, Caroline, Hiatt, Joseph B., Patton, Robert D., De Sarkar, Navonil, Collier, Katharine A., Hoge, Anna C. H., Chen, Katharine, Zimmer, Anat, Weber, Zachary T., Adil, Mohamed, Reichel, Jonathan B., Polak, Paz, Adalsteinsson, Viktor A., Nelson, Peter S., MacPherson, David, Parsons, Heather A., Stover, Daniel G., Ha, Gavin
Publicado 2022

Author Correction: A framework for clinical cancer subtyping from nucleosome profiling of cell-free DNA

por Doebley, Anna-Lisa, Ko, Minjeong, Liao, Hanna, Cruikshank, A. Eden, Santos, Katheryn, Kikawa, Caroline, Hiatt, Joseph B., Patton, Robert D., De Sarkar, Navonil, Collier, Katharine A., Hoge, Anna C. H., Chen, Katharine, Zimmer, Anat, Weber, Zachary T., Adil, Mohamed, Reichel, Jonathan B., Polak, Paz, Adalsteinsson, Viktor A., Nelson, Peter S., MacPherson, David, Parsons, Heather A., Stover, Daniel G., Ha, Gavin
Publicado 2023

Nucleosome Patterns in Circulating Tumor DNA Reveal Transcriptional Regulation of Advanced Prostate Cancer Phenotypes

por De Sarkar, Navonil, Patton, Robert D., Doebley, Anna-Lisa, Hanratty, Brian, Adil, Mohamed, Kreitzman, Adam J., Sarthy, Jay F., Ko, Minjeong, Brahma, Sandipan, Meers, Michael P., Janssens, Derek H., Ang, Lisa S., Coleman, Ilsa M., Bose, Arnab, Dumpit, Ruth F., Lucas, Jared M., Nunez, Talina A., Nguyen, Holly M., McClure, Heather M., Pritchard, Colin C., Schweizer, Michael T., Morrissey, Colm, Choudhury, Atish D., Baca, Sylvan C., Berchuck, Jacob E., Freedman, Matthew L., Ahmad, Kami, Haffner, Michael C., Montgomery, R. Bruce, Corey, Eva, Henikoff, Steven, Nelson, Peter S., Ha, Gavin
Publicado 2023