A survey of visualization tools for biological network analysis

por Pavlopoulos, Georgios A, Wegener, Anna-Lynn, Schneider, Reinhard
Publicado 2008

Protocol for unbiased, consolidated variant calling from whole exome sequencing data

por Verrou, Kleio-Maria, Pavlopoulos, Georgios A., Moulos, Panagiotis
Publicado 2022

Arena3D: visualizing time-driven phenotypic differences in biological systems

por Secrier, Maria, Pavlopoulos, Georgios A, Aerts, Jan, Schneider, Reinhard
Publicado 2012

NORMA: The Network Makeup Artist — A Web Tool for Network Annotation Visualization

por Koutrouli, Mikaela, Karatzas, Evangelos, Papanikolopoulou, Katerina, Pavlopoulos, Georgios A.
Publicado 2022

Corrigendum: A guide to conquer the biological network era using graph theory

por Koutrouli, Mikaela, Karatzas, Evangelos, Paez-Espino, David, Pavlopoulos, Georgios A.
Publicado 2023

A Guide to Conquer the Biological Network Era Using Graph Theory

por Koutrouli, Mikaela, Karatzas, Evangelos, Paez-Espino, David, Pavlopoulos, Georgios A.
Publicado 2020

A reference guide for tree analysis and visualization

por Pavlopoulos, Georgios A, Soldatos, Theodoros G, Barbosa-Silva, Adriano, Schneider, Reinhard
Publicado 2010

DrugQuest - a text mining workflow for drug association discovery

por Papanikolaou, Nikolas, Pavlopoulos, Georgios A., Theodosiou, Theodosios, Vizirianakis, Ioannis S., Iliopoulos, Ioannis
Publicado 2016

Empirical Comparison of Visualization Tools for Larger-Scale Network Analysis

por Pavlopoulos, Georgios A., Paez-Espino, David, Kyrpides, Nikos C., Iliopoulos, Ioannis
Publicado 2017

OnTheFly: a tool for automated document-based text annotation, data linking and network generation

por Pavlopoulos, Georgios A., Pafilis, Evangelos, Kuhn, M., Hooper, Sean D., Schneider, Reinhard
Publicado 2009

Medusa: A tool for exploring and clustering biological networks

por Pavlopoulos, Georgios A, Hooper, Sean D, Sifrim, Alejandro, Schneider, Reinhard, Aerts, Jan
Publicado 2011

GIBA: a clustering tool for detecting protein complexes

por Moschopoulos, Charalampos N, Pavlopoulos, Georgios A, Schneider, Reinhard, Likothanassis, Spiridon D, Kossida, Sophia
Publicado 2009

jClust: a clustering and visualization toolbox

por Pavlopoulos, Georgios A., Moschopoulos, Charalampos N., Hooper, Sean D., Schneider, Reinhard, Kossida, Sophia
Publicado 2009

HipMCL: a high-performance parallel implementation of the Markov clustering algorithm for large-scale networks

por Azad, Ariful, Pavlopoulos, Georgios A, Ouzounis, Christos A, Kyrpides, Nikos C, Buluç, Aydin
Publicado 2018

Arena3D(web): interactive 3D visualization of multilayered networks

por Karatzas, Evangelos, Baltoumas, Fotis A, Panayiotou, Nikolaos A, Schneider, Reinhard, Pavlopoulos, Georgios A
Publicado 2021

SCALA: A complete solution for multimodal analysis of single-cell Next Generation Sequencing data

por Tzaferis, Christos, Karatzas, Evangelos, Baltoumas, Fotis A., Pavlopoulos, Georgios A., Kollias, George, Konstantopoulos, Dimitris
Publicado 2023

Visualizing genome and systems biology: technologies, tools, implementation techniques and trends, past, present and future

por Pavlopoulos, Georgios A., Malliarakis, Dimitris, Papanikolaou, Nikolas, Theodosiou, Theodosis, Enright, Anton J., Iliopoulos, Ioannis
Publicado 2015

Data and programs in support of network analysis of genes and their association with diseases

por Kontou, Panagiota I., Pavlopoulou, Athanasia, Dimou, Niki L., Pavlopoulos, Georgios A., Bagos, Pantelis G.
Publicado 2016

PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types

por Zafeiropoulos, Haris, Paragkamian, Savvas, Ninidakis, Stelios, Pavlopoulos, Georgios A., Jensen, Lars Juhl, Pafilis, Evangelos
Publicado 2022

The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies

por Karatzas, Evangelos, Koutrouli, Mikaela, Baltoumas, Fotis A, Papanikolopoulou, Katerina, Bouyioukos, Costas, Pavlopoulos, Georgios A
Publicado 2022