Detecting fabrication in large-scale molecular omics data

por Bradshaw, Michael S., Payne, Samuel H.
Publicado 2021

PGP: parallel prokaryotic proteogenomics pipeline for MPI clusters, high-throughput batch clusters and multicore workstations

por Tovchigrechko, Andrey, Venepally, Pratap, Payne, Samuel H.
Publicado 2014

Multi-species Identification of Polymorphic Peptide Variants via Propagation in Spectral Networks

por Na, Seungjin, Payne, Samuel H., Bandeira, Nuno
Publicado 2016

A proteogenomic update to Yersinia: enhancing genome annotation

por Payne, Samuel H, Huang, Shih-Ting, Pieper, Rembert
Publicado 2010

Proteogenomic Analysis of Bacteria and Archaea: A 46 Organism Case Study

por Venter, Eli, Smith, Richard D., Payne, Samuel H.
Publicado 2011

Reproducibility and Transparency by Design

por Petyuk, Vladislav A., Gatto, Laurent, Payne, Samuel H.
Publicado 2019

Ethical data sharing in forensic research

por Allen, Carolyn I., Payne, Samuel H., Valentine, Julie L.
Publicado 2023

Calculating Sample Size Requirements for Temporal Dynamics in Single-Cell Proteomics

por Boekweg, Hannah, Guise, Amanda J., Plowey, Edward D., Kelly, Ryan T., Payne, Samuel H.
Publicado 2021

Evaluating a large language model’s ability to solve programming exercises from an introductory bioinformatics course

por Piccolo, Stephen R., Denny, Paul, Luxton-Reilly, Andrew, Payne, Samuel H., Ridge, Perry G.
Publicado 2023

Blazing Signature Filter: a library for fast pairwise similarity comparisons

por Lee, Joon-Yong, Fujimoto, Grant M., Wilson, Ryan, Wiley, H. Steven, Payne, Samuel H.
Publicado 2018

Bacterial Longevity Requires Protein Synthesis and a Stringent Response

por Yin, Liang, Ma, Hongyu, Nakayasu, Ernesto S., Payne, Samuel H., Morris, David R., Harwood, Caroline S.
Publicado 2019

Correcting systematic bias and instrument measurement drift with mzRefinery

por Gibbons, Bryson C., Chambers, Matthew C., Monroe, Matthew E., Tabb, David L., Payne, Samuel H.
Publicado 2015

Immediate Extubation Following Placement of Mandibular Distractors: Feasibility and Safety Profile

por Payne, Samuel H., Mercury, Oblaise A., Soldanska, Magdalena, Hush, Stefanie, Williams, Joseph K., Brady, Colin
Publicado 2020

Simplified and Unified Access to Cancer Proteogenomic Data

por Lindgren, Caleb M., Adams, David W., Kimball, Benjamin, Boekweg, Hannah, Tayler, Sadie, Pugh, Samuel L., Payne, Samuel H.
Publicado 2021

Online Tools for Teaching Cancer Bioinformatics

por Taylor, Mason D., Mendenhall, Bryn, Woods, Calvin S., Rasband, Madeline E., Vallejo, Milene C., Bailey, Elizabeth G., Payne, Samuel H.
Publicado 2021

PECAN: Library Free Peptide Detection for Data-Independent Acquisition Tandem Mass Spectrometry Data

por Ting, Ying S., Egertson, Jarrett D., Bollinger, James G., Searle, Brian C., Payne, Samuel H., Noble, William Stafford, MacCoss, Michael J.
Publicado 2017

Toward a standard in structural genome annotation for prokaryotes

por Tripp, H. James, Sutton, Granger, White, Owen, Wortman, Jennifer, Pati, Amrita, Mikhailova, Natalia, Ovchinnikova, Galina, Payne, Samuel H., Kyrpides, Nikos C., Ivanova, Natalia
Publicado 2015

Unexpected Diversity of Signal Peptides in Prokaryotes

por Payne, Samuel H., Bonissone, Stefano, Wu, Si, Brown, Roslyn N., Ivankov, Dmitry N., Frishman, Dmitrij, Paša-Tolić, Ljiljana, Smith, Richard D., Pevzner, Pavel A.
Publicado 2012

Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli

por Christensen, David G., Meyer, Jesse G., Baumgartner, Jackson T., D’Souza, Alexandria K., Nelson, William C., Payne, Samuel H., Kuhn, Misty L., Schilling, Birgit, Wolfe, Alan J.
Publicado 2018

Correction for Christensen et al., “Identification of Novel Protein Lysine Acetyltransferases in Escherichia coli”

por Christensen, David G., Meyer, Jesse G., Baumgartner, Jackson T., D’Souza, Alexandria K., Nelson, William C., Payne, Samuel H., Kuhn, Misty L., Schilling, Birgit, Wolfe, Alan J.
Publicado 2019