Improving Bloom Filter Performance on Sequence Data Using k-mer Bloom Filters

por Pellow, David, Filippova, Darya, Kingsford, Carl
Publicado 2017

PlasClass improves plasmid sequence classification

por Pellow, David, Mizrahi, Itzik, Shamir, Ron
Publicado 2020

Parameterized syncmer schemes improve long-read mapping

por Dutta, Abhinav, Pellow, David, Shamir, Ron
Publicado 2022

Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing

por Orenstein, Yaron, Pellow, David, Marçais, Guillaume, Shamir, Ron, Kingsford, Carl
Publicado 2017

Improving the performance of minimizers and winnowing schemes

por Marçais, Guillaume, Pellow, David, Bork, Daniel, Orenstein, Yaron, Shamir, Ron, Kingsford, Carl
Publicado 2017

Efficient minimizer orders for large values of k using minimum decycling sets

por Pellow, David, Pu, Lianrong, Ekim, Bariş, Kotlar, Lior, Berger, Bonnie, Shamir, Ron, Orenstein, Yaron
Publicado 2023

SCAPP: an algorithm for improved plasmid assembly in metagenomes

por Pellow, David, Zorea, Alvah, Probst, Maraike, Furman, Ori, Segal, Arik, Mizrahi, Itzhak, Shamir, Ron
Publicado 2021

The Human Right to Water: A 20-Year Comparative Analysis of Arsenic in Rural and Carceral Drinking Water Systems in California

por Rempel, Jenny, Ray, Isha, Hessl, Ethan, Vazin, Jasmine, Zhou, Zehui, Kim, Shin, Zhang, Xuan, Ding, Chiyu, He, Ziyi, Pellow, David, Cohen, Alasdair
Publicado 2022