sRNARFTarget: a fast machine-learning-based approach for transcriptome-wide sRNA target prediction

por Naskulwar, Kratika, Peña-Castillo, Lourdes
Publicado 2021

Promotech: a general tool for bacterial promoter recognition

por Chevez-Guardado, Ruben, Peña-Castillo, Lourdes
Publicado 2021

Genetic variation associated with healthy traits and environmental conditions in Vaccinium vitis-idaea

por Alam, Zobayer, Roncal, Julissa, Peña-Castillo, Lourdes
Publicado 2018

Prioritizing bona fide bacterial small RNAs with machine learning classifiers

por Eppenhof, Erik J.J., Peña-Castillo, Lourdes
Publicado 2019

A Study on the Geometric and Kinematic Descriptors of Trajectories in the Classification of Ship Types

por Tavakoli, Yashar, Peña-Castillo, Lourdes, Soares, Amilcar
Publicado 2022

Detecting ulcerative colitis from colon samples using efficient feature selection and machine learning

por Khorasani, Hanieh Marvi, Usefi, Hamid, Peña-Castillo, Lourdes
Publicado 2020

Metagenomic analysis suggests broad metabolic potential in extracellular symbionts of the bivalve Thyasira cf. gouldi

por McCuaig, Bonita, Peña-Castillo, Lourdes, Dufour, Suzanne C.
Publicado 2020

Genome-wide identification and characterization of small RNAs in Rhodobacter capsulatus and identification of small RNAs affected by loss of the response regulator CtrA

por Grüll, Marc P., Peña-Castillo, Lourdes, Mulligan, Martin E., Lang, Andrew S.
Publicado 2017

GeNET: a web application to explore and share Gene Co-expression Network Analysis data

por Desai, Amit P., Razeghin, Mehdi, Meruvia-Pastor, Oscar, Peña-Castillo, Lourdes
Publicado 2017

Simultaneous host and parasite expression profiling identifies tissue-specific transcriptional programs associated with susceptibility or resistance to experimental cerebral malari...

por Lovegrove, Fiona E, Peña-Castillo, Lourdes, Mohammad, Naveed, Liles, W Conrad, Hughes, Timothy R, Kain, Kevin C
Publicado 2006

Gene co-expression network analysis in Rhodobacter capsulatus and application to comparative expression analysis of Rhodobacter sphaeroides

por Peña-Castillo, Lourdes, Mercer, Ryan G, Gurinovich, Anastasia, Callister, Stephen J, Wright, Aaron T, Westbye, Alexander B, Beatty, J Thomas, Lang, Andrew S
Publicado 2014

Parasite Burden and CD36-Mediated Sequestration Are Determinants of Acute Lung Injury in an Experimental Malaria Model

por Lovegrove, Fiona E., Gharib, Sina A., Peña-Castillo, Lourdes, Patel, Samir N., Ruzinski, John T., Hughes, Timothy R., Liles, W. Conrad, Kain, Kevin C.
Publicado 2008

Extracellular vesicle small RNA cargo discriminates non-cancer donors from pediatric B-lymphoblastic leukemia patients

por Longjohn, Modeline N., Hudson, Jo-Anna B. J., Peña-Castillo, Lourdes, Cormier, Robert P. J., Hannay, Brandon, Chacko, Simi, Lewis, Stephen M., Moorehead, Paul C., Christian, Sherri L.
Publicado 2023

Predicting the binding preference of transcription factors to individual DNA k-mers

por Alleyne, Trevis M., Peña-Castillo, Lourdes, Badis, Gwenael, Talukder, Shaheynoor, Berger, Michael F., Gehrke, Andrew R., Philippakis, Anthony A., Bulyk, Martha L., Morris, Quaid D., Hughes, Timothy R.
Publicado 2009

Learning-induced mRNA alterations in olfactory bulb mitral cells in neonatal rats

por Nartey, Michaelina N., Peña-Castillo, Lourdes, LeGrow, Megan, Doré, Jules, Bhattacharya, Sriya, Darby-King, Andrea, Carew, Samantha J., Yuan, Qi, Harley, Carolyn W., McLean, John H.
Publicado 2020

Private rare deletions in SEC16A and MAMDC4 may represent novel pathogenic variants in familial axial spondyloarthritis

por O'Rielly, Darren D, Uddin, Mohammed, Codner, Dianne, Hayley, Michael, Zhou, Jiayi, Pena-Castillo, Lourdes, Mostafa, Ahmed A, Hasan, S M Mahmudul, Liu, William, Haroon, Nigil, Inman, Robert, Rahman, Proton
Publicado 2016

CD24 induces changes to the surface receptors of B cell microvesicles with variable effects on their RNA and protein cargo

por Ayre, D. Craig, Chute, Ian C., Joy, Andrew P., Barnett, David A., Hogan, Andrew M., Grüll, Marc P., Peña-Castillo, Lourdes, Lang, Andrew S., Lewis, Stephen M., Christian, Sherri L.
Publicado 2017

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

por Peña-Castillo, Lourdes, Tasan, Murat, Myers, Chad L, Lee, Hyunju, Joshi, Trupti, Zhang, Chao, Guan, Yuanfang, Leone, Michele, Pagnani, Andrea, Kim, Wan Kyu, Krumpelman, Chase, Tian, Weidong, Obozinski, Guillaume, Qi, Yanjun, Mostafavi, Sara, Lin, Guan Ning, Berriz, Gabriel F, Gibbons, Francis D, Lanckriet, Gert, Qiu, Jian, Grant, Charles, Barutcuoglu, Zafer, Hill, David P, Warde-Farley, David, Grouios, Chris, Ray, Debajyoti, Blake, Judith A, Deng, Minghua, Jordan, Michael I, Noble, William S, Morris, Quaid, Klein-Seetharaman, Judith, Bar-Joseph, Ziv, Chen, Ting, Sun, Fengzhu, Troyanskaya, Olga G, Marcotte, Edward M, Xu, Dong, Hughes, Timothy R, Roth, Frederick P
Publicado 2008