Understanding dynamics using sensitivity analysis: caveat and solution

por Perumal, Thanneer M, Gunawan, Rudiyanto
Publicado 2011

Detecting cellular reprogramming determinants by differential stability analysis of gene regulatory networks

por Crespo, Isaac, Perumal, Thanneer M, Jurkowski, Wiktor, del Sol, Antonio
Publicado 2013

Disentangling personalized treatment effects from “time-of-the-day” confounding in mobile health studies

por Chaibub Neto, Elias, Perumal, Thanneer M., Pratap, Abhishek, Tediarjo, Aryton, Bot, Brian M., Mangravite, Lara, Omberg, Larsson
Publicado 2022

Identifying and ranking potential driver genes of Alzheimer’s disease using multiview evidence aggregation

por Mukherjee, Sumit, Perumal, Thanneer M, Daily, Kenneth, Sieberts, Solveig K, Omberg, Larsson, Preuss, Christoph, Carter, Gregory W, Mangravite, Lara M, Logsdon, Benjamin A
Publicado 2019

Detecting the impact of subject characteristics on machine learning-based diagnostic applications

por Chaibub Neto, Elias, Pratap, Abhishek, Perumal, Thanneer M., Tummalacherla, Meghasyam, Snyder, Phil, Bot, Brian M., Trister, Andrew D., Friend, Stephen H., Mangravite, Lara, Omberg, Larsson
Publicado 2019

TRIM32 modulates pluripotency entry and exit by directly regulating Oct4 stability

por Bahnassawy, Lamia’a, Perumal, Thanneer M., Gonzalez-Cano, Laura, Hillje, Anna-Lena, Taher, Leila, Makalowski, Wojciech, Suzuki, Yutaka, Fuellen, Georg, Sol, Antonio del, Schwamborn, Jens Christian
Publicado 2015

Integrating Pathways of Parkinson's Disease in a Molecular Interaction Map

por Fujita, Kazuhiro A., Ostaszewski, Marek, Matsuoka, Yukiko, Ghosh, Samik, Glaab, Enrico, Trefois, Christophe, Crespo, Isaac, Perumal, Thanneer M., Jurkowski, Wiktor, Antony, Paul M. A., Diederich, Nico, Buttini, Manuel, Kodama, Akihiko, Satagopam, Venkata P., Eifes, Serge, del Sol, Antonio, Schneider, Reinhard, Kitano, Hiroaki, Balling, Rudi
Publicado 2013

Landscape of Conditional eQTL in Dorsolateral Prefrontal Cortex and Co-localization with Schizophrenia GWAS

por Dobbyn, Amanda, Huckins, Laura M., Boocock, James, Sloofman, Laura G., Glicksberg, Benjamin S., Giambartolomei, Claudia, Hoffman, Gabriel E., Perumal, Thanneer M., Girdhar, Kiran, Jiang, Yan, Raj, Towfique, Ruderfer, Douglas M., Kramer, Robin S., Pinto, Dalila, Akbarian, Schahram, Roussos, Panos, Domenici, Enrico, Devlin, Bernie, Sklar, Pamela, Stahl, Eli A., Sieberts, Solveig K.
Publicado 2018

Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions

por Sieberts, Solveig K., Perumal, Thanneer M., Carrasquillo, Minerva M., Allen, Mariet, Reddy, Joseph S., Hoffman, Gabriel E., Dang, Kristen K., Calley, John, Ebert, Philip J., Eddy, James, Wang, Xue, Greenwood, Anna K., Mostafavi, Sara, Omberg, Larsson, Peters, Mette A., Logsdon, Benjamin A., De Jager, Philip L., Ertekin-Taner, Nilüfer, Mangravite, Lara M.
Publicado 2020

Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives

por Daily, Kenneth, Ho Sui, Shannan J., Schriml, Lynn M., Dexheimer, Phillip J., Salomonis, Nathan, Schroll, Robin, Bush, Stacy, Keddache, Mehdi, Mayhew, Christopher, Lotia, Samad, Perumal, Thanneer M., Dang, Kristen, Pantano, Lorena, Pico, Alexander R., Grassman, Elke, Nordling, Diana, Hide, Winston, Hatzopoulos, Antonis K., Malik, Punam, Cancelas, Jose A., Lutzko, Carolyn, Aronow, Bruce J., Omberg, Larsson
Publicado 2017

A community approach to mortality prediction in sepsis via gene expression analysis

por Sweeney, Timothy E., Perumal, Thanneer M., Henao, Ricardo, Nichols, Marshall, Howrylak, Judith A., Choi, Augustine M., Bermejo-Martin, Jesús F., Almansa, Raquel, Tamayo, Eduardo, Davenport, Emma E., Burnham, Katie L., Hinds, Charles J., Knight, Julian C., Woods, Christopher W., Kingsmore, Stephen F., Ginsburg, Geoffrey S., Wong, Hector R., Parnell, Grant P., Tang, Benjamin, Moldawer, Lyle L., Moore, Frederick E., Omberg, Larsson, Khatri, Purvesh, Tsalik, Ephraim L., Mangravite, Lara M., Langley, Raymond J.
Publicado 2018

Crowdsourcing digital health measures to predict Parkinson’s disease severity: the Parkinson’s Disease Digital Biomarker DREAM Challenge

por Sieberts, Solveig K., Schaff, Jennifer, Duda, Marlena, Pataki, Bálint Ármin, Sun, Ming, Snyder, Phil, Daneault, Jean-Francois, Parisi, Federico, Costante, Gianluca, Rubin, Udi, Banda, Peter, Chae, Yooree, Chaibub Neto, Elias, Dorsey, E. Ray, Aydın, Zafer, Chen, Aipeng, Elo, Laura L., Espino, Carlos, Glaab, Enrico, Goan, Ethan, Golabchi, Fatemeh Noushin, Görmez, Yasin, Jaakkola, Maria K., Jonnagaddala, Jitendra, Klén, Riku, Li, Dongmei, McDaniel, Christian, Perrin, Dimitri, Perumal, Thanneer M., Rad, Nastaran Mohammadian, Rainaldi, Erin, Sapienza, Stefano, Schwab, Patrick, Shokhirev, Nikolai, Venäläinen, Mikko S., Vergara-Diaz, Gloria, Zhang, Yuqian, Wang, Yuanjia, Guan, Yuanfang, Brunner, Daniela, Bonato, Paolo, Mangravite, Lara M., Omberg, Larsson
Publicado 2021

Gene Expression Elucidates Functional Impact of Polygenic Risk for Schizophrenia

por Fromer, Menachem, Roussos, Panos, Sieberts, Solveig K, Johnson, Jessica S, Kavanagh, David H, Perumal, Thanneer M, Ruderfer, Douglas M, Oh, Edwin C, Topol, Aaron, Shah, Hardik R, Klei, Lambertus L, Kramer, Robin, Pinto, Dalila, Gümüş, Zeynep H, Cicek, A. Ercument, Dang, Kristen K, Browne, Andrew, Lu, Cong, Xie, Lu, Readhead, Ben, Stahl, Eli A, Parvizi, Mahsa, Hamamsy, Tymor, Fullard, John F, Wang, Ying-Chih, Mahajan, Milind C, Derry, Jonathan M J, Dudley, Joel, Hemby, Scott E, Logsdon, Benjamin A, Talbot, Konrad, Raj, Towfique, Bennett, David A, De Jager, Philip L, Zhu, Jun, Zhang, Bin, Sullivan, Patrick F, Chess, Andrew, Purcell, Shaun M, Shinobu, Leslie A, Mangravite, Lara M, Toyoshiba, Hiroyoshi, Gur, Raquel E, Hahn, Chang-Gyu, Lewis, David A, Haroutunian, Vahram, Peters, Mette A, Lipska, Barbara K, Buxbaum, Joseph D, Schadt, Eric E, Hirai, Keisuke, Roeder, Kathryn, Brennand, Kristen J, Katsanis, Nicholas, Domenici, Enrico, Devlin, Bernie, Sklar, Pamela
Publicado 2016

Meta-Analysis of the Alzheimer’s Disease Human Brain Transcriptome and Functional Dissection in Mouse Models

por Wan, Ying-Wooi, Al-Ouran, Rami, Mangleburg, Carl G., Perumal, Thanneer M., Lee, Tom V., Allison, Katherine, Swarup, Vivek, Funk, Cory C., Gaiteri, Chris, Allen, Mariet, Wang, Minghui, Neuner, Sarah M., Kaczorowski, Catherine C., Philip, Vivek M., Howell, Gareth R., Martini-Stoica, Heidi, Zheng, Hui, Mei, Hongkang, Zhong, Xiaoyan, Kim, Jungwoo Wren, Dawson, Valina L., Dawson, Ted M., Pao, Ping-Chieh, Tsai, Li-Huei, Haure-Mirande, Jean-Vianney, Ehrlich, Michelle E., Chakrabarty, Paramita, Levites, Yona, Wang, Xue, Dammer, Eric B., Srivastava, Gyan, Mukherjee, Sumit, Sieberts, Solveig K., Omberg, Larsson, Dang, Kristen D., Eddy, James A., Snyder, Phil, Chae, Yooree, Amberkar, Sandeep, Wei, Wenbin, Hide, Winston, Preuss, Christoph, Ergun, Ayla, Ebert, Phillip J., Airey, David C., Mostafavi, Sara, Yu, Lei, Klein, Hans-Ulrich, Carter, Gregory W., Collier, David A., Golde, Todd E., Levey, Allan I., Bennett, David A., Estrada, Karol, Townsend, T. Matthew, Zhang, Bin, Schadt, Eric, De Jager, Philip L., Price, Nathan D., Ertekin-Taner, Nilüfer, Liu, Zhandong, Shulman, Joshua M., Mangravite, Lara M., Logsdon, Benjamin A.
Publicado 2020