Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria and Archaea Along a Mediterranean—Atlantic Gradient

by Trouche, Blandine, Brandt, Miriam I., Belser, Caroline, Orejas, Covadonga, Pesant, Stéphane, Poulain, Julie, Wincker, Patrick, Auguet, Jean-Christophe, Arnaud-Haond, Sophie, Maignien, Loïs
Published 2021

Open science resources for the discovery and analysis of Tara Oceans data

by Pesant, Stéphane, Not, Fabrice, Picheral, Marc, Kandels-Lewis, Stefanie, Le Bescot, Noan, Gorsky, Gabriel, Iudicone, Daniele, Karsenti, Eric, Speich, Sabrina, Troublé, Romain, Dimier, Céline, Searson, Sarah
Published 2015

Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards

by ten Hoopen, Petra, Pesant, Stéphane, Kottmann, Renzo, Kopf, Anna, Bicak, Mesude, Claus, Simon, Deneudt, Klaas, Borremans, Catherine, Thijsse, Peter, Dekeyzer, Stefanie, Schaap, Dick MA, Bowler, Chris, Glöckner, Frank Oliver, Cochrane, Guy
Published 2015

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes

by Hingamp, Pascal, Grimsley, Nigel, Acinas, Silvia G, Clerissi, Camille, Subirana, Lucie, Poulain, Julie, Ferrera, Isabel, Sarmento, Hugo, Villar, Emilie, Lima-Mendez, Gipsi, Faust, Karoline, Sunagawa, Shinichi, Claverie, Jean-Michel, Moreau, Hervé, Desdevises, Yves, Bork, Peer, Raes, Jeroen, de Vargas, Colomban, Karsenti, Eric, Kandels-Lewis, Stefanie, Jaillon, Olivier, Not, Fabrice, Pesant, Stéphane, Wincker, Patrick, Ogata, Hiroyuki
Published 2013

A Holistic Approach to Marine Eco-Systems Biology

by Karsenti, Eric, Acinas, Silvia G., Bork, Peer, Bowler, Chris, De Vargas, Colomban, Raes, Jeroen, Sullivan, Matthew, Arendt, Detlev, Benzoni, Francesca, Claverie, Jean-Michel, Follows, Mick, Gorsky, Gaby, Hingamp, Pascal, Iudicone, Daniele, Jaillon, Olivier, Kandels-Lewis, Stefanie, Krzic, Uros, Not, Fabrice, Ogata, Hiroyuki, Pesant, Stéphane, Reynaud, Emmanuel Georges, Sardet, Christian, Sieracki, Michael E., Speich, Sabrina, Velayoudon, Didier, Weissenbach, Jean, Wincker, Patrick
Published 2011

The European Nucleotide Archive in 2022

by Burgin, Josephine, Ahamed, Alisha, Cummins, Carla, Devraj, Rajkumar, Gueye, Khadim, Gupta, Dipayan, Gupta, Vikas, Haseeb, Muhammad, Ihsan, Maira, Ivanov, Eugene, Jayathilaka, Suran, Balavenkataraman Kadhirvelu, Vishnukumar, Kumar, Manish, Lathi, Ankur, Leinonen, Rasko, Mansurova, Milena, McKinnon, Jasmine, O’Cathail, Colman, Paupério, Joana, Pesant, Stéphane, Rahman, Nadim, Rinck, Gabriele, Selvakumar, Sandeep, Suman, Swati, Vijayaraja, Senthilnathan, Waheed, Zahra, Woollard, Peter, Yuan, David, Zyoud, Ahmad, Burdett, Tony, Cochrane, Guy
Published 2022

Inter-comparison of marine microbiome sampling protocols

by Pascoal, Francisco, Tomasino, Maria Paola, Piredda, Roberta, Quero, Grazia Marina, Torgo, Luís, Poulain, Julie, Galand, Pierre E., Fuhrman, Jed A., Mitchell, Alex, Tinta, Tinkara, Turk Dermastia, Timotej, Fernandez-Guerra, Antonio, Vezzi, Alessandro, Logares, Ramiro, Malfatti, Francesca, Endo, Hisashi, Dąbrowska, Anna Maria, De Pascale, Fabio, Sánchez, Pablo, Henry, Nicolas, Fosso, Bruno, Wilson, Bryan, Toshchakov, Stephan, Ferrant, Gregory Kevin, Grigorov, Ivo, Vieira, Fabio Rocha Jimenez, Costa, Rodrigo, Pesant, Stéphane, Magalhães, Catarina
Published 2023

The Tara Pacific expedition—A pan-ecosystemic approach of the “-omics” complexity of coral reef holobionts across the Pacific Ocean

by Planes, Serge, Allemand, Denis, Agostini, Sylvain, Banaigs, Bernard, Boissin, Emilie, Boss, Emmanuel, Bourdin, Guillaume, Bowler, Chris, Douville, Eric, Flores, J. Michel, Forcioli, Didier, Furla, Paola, Galand, Pierre E., Ghiglione, Jean-François, Gilson, Eric, Lombard, Fabien, Moulin, Clémentine, Pesant, Stephane, Poulain, Julie, Reynaud, Stéphanie, Romac, Sarah, Sullivan, Matthew B., Sunagawa, Shinichi, Thomas, Olivier P., Troublé, Romain, de Vargas, Colomban, Vega Thurber, Rebecca, Voolstra, Christian R., Wincker, Patrick, Zoccola, Didier
Published 2019

The European Nucleotide Archive in 2020

by Harrison, Peter W, Ahamed, Alisha, Aslam, Raheela, Alako, Blaise T F, Burgin, Josephine, Buso, Nicola, Courtot, Mélanie, Fan, Jun, Gupta, Dipayan, Haseeb, Muhammad, Holt, Sam, Ibrahim, Talal, Ivanov, Eugene, Jayathilaka, Suran, Balavenkataraman Kadhirvelu, Vishnukumar, Kumar, Manish, Lopez, Rodrigo, Kay, Simon, Leinonen, Rasko, Liu, Xin, O’Cathail, Colman, Pakseresht, Amir, Park, Youngmi, Pesant, Stephane, Rahman, Nadim, Rajan, Jeena, Sokolov, Alexey, Vijayaraja, Senthilnathan, Waheed, Zahra, Zyoud, Ahmad, Burdett, Tony, Cochrane, Guy
Published 2020

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

by Acinas, Silvia G., Sánchez, Pablo, Salazar, Guillem, Cornejo-Castillo, Francisco M., Sebastián, Marta, Logares, Ramiro, Royo-Llonch, Marta, Paoli, Lucas, Sunagawa, Shinichi, Hingamp, Pascal, Ogata, Hiroyuki, Lima-Mendez, Gipsi, Roux, Simon, González, José M., Arrieta, Jesús M., Alam, Intikhab S., Kamau, Allan, Bowler, Chris, Raes, Jeroen, Pesant, Stéphane, Bork, Peer, Agustí, Susana, Gojobori, Takashi, Vaqué, Dolors, Sullivan, Matthew B., Pedrós-Alió, Carlos, Massana, Ramon, Duarte, Carlos M., Gasol, Josep M.
Published 2021

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

by Seeleuthner, Yoann, Mondy, Samuel, Lombard, Vincent, Carradec, Quentin, Pelletier, Eric, Wessner, Marc, Leconte, Jade, Mangot, Jean-François, Poulain, Julie, Labadie, Karine, Logares, Ramiro, Sunagawa, Shinichi, de Berardinis, Véronique, Salanoubat, Marcel, Dimier, Céline, Kandels-Lewis, Stefanie, Picheral, Marc, Searson, Sarah, Pesant, Stephane, Poulton, Nicole, Stepanauskas, Ramunas, Bork, Peer, Bowler, Chris, Hingamp, Pascal, Sullivan, Matthew B., Iudicone, Daniele, Massana, Ramon, Aury, Jean-Marc, Henrissat, Bernard, Karsenti, Eric, Jaillon, Olivier, Sieracki, Mike, de Vargas, Colomban, Wincker, Patrick
Published 2018

Ocean-wide comparisons of mesopelagic planktonic community structures

by Rigonato, Janaina, Budinich, Marko, Murillo, Alejandro A., Brandão, Manoela C., Pierella Karlusich, Juan J., Soviadan, Yawouvi Dodji, Gregory, Ann C., Endo, Hisashi, Kokoszka, Florian, Vik, Dean, Henry, Nicolas, Frémont, Paul, Labadie, Karine, Zayed, Ahmed A., Dimier, Céline, Picheral, Marc, Searson, Sarah, Poulain, Julie, Kandels, Stefanie, Pesant, Stéphane, Karsenti, Eric, Bork, Peer, Bowler, Chris, de Vargas, Colomban, Eveillard, Damien, Gehlen, Marion, Iudicone, Daniele, Lombard, Fabien, Ogata, Hiroyuki, Stemmann, Lars, Sullivan, Matthew B., Sunagawa, Shinichi, Wincker, Patrick, Chaffron, Samuel, Jaillon, Olivier
Published 2023

The European Nucleotide Archive in 2021

by Cummins, Carla, Ahamed, Alisha, Aslam, Raheela, Burgin, Josephine, Devraj, Rajkumar, Edbali, Ossama, Gupta, Dipayan, Harrison, Peter W, Haseeb, Muhammad, Holt, Sam, Ibrahim, Talal, Ivanov, Eugene, Jayathilaka, Suran, Kadhirvelu, Vishnukumar, Kay, Simon, Kumar, Manish, Lathi, Ankur, Leinonen, Rasko, Madeira, Fabio, Madhusoodanan, Nandana, Mansurova, Milena, O’Cathail, Colman, Pearce, Matt, Pesant, Stéphane, Rahman, Nadim, Rajan, Jeena, Rinck, Gabriele, Selvakumar, Sandeep, Sokolov, Alexey, Suman, Swati, Thorne, Ross, Totoo, Prabhat, Vijayaraja, Senthilnathan, Waheed, Zahra, Zyoud, Ahmad, Lopez, Rodrigo, Burdett, Tony, Cochrane, Guy
Published 2021

Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes

by Veglia, Alex J., Bistolas, Kalia S. I., Voolstra, Christian R., Hume, Benjamin C. C., Ruscheweyh, Hans-Joachim, Planes, Serge, Allemand, Denis, Boissin, Emilie, Wincker, Patrick, Poulain, Julie, Moulin, Clémentine, Bourdin, Guillaume, Iwankow, Guillaume, Romac, Sarah, Agostini, Sylvain, Banaigs, Bernard, Boss, Emmanuel, Bowler, Chris, de Vargas, Colomban, Douville, Eric, Flores, Michel, Forcioli, Didier, Furla, Paola, Galand, Pierre E., Gilson, Eric, Lombard, Fabien, Pesant, Stéphane, Reynaud, Stéphanie, Sunagawa, Shinichi, Thomas, Olivier P., Troublé, Romain, Zoccola, Didier, Correa, Adrienne M. S., Vega Thurber, Rebecca L.
Published 2023

Differences in carbonate chemistry up-regulation of long-lived reef-building corals

by Canesi, Marine, Douville, Eric, Montagna, Paolo, Taviani, Marco, Stolarski, Jarosław, Bordier, Louise, Dapoigny, Arnaud, Coulibaly, Gninwoyo Eric Hermann, Simon, Anne-Catherine, Agelou, Mathieu, Fin, Jonathan, Metzl, Nicolas, Iwankow, Guillaume, Allemand, Denis, Planes, Serge, Moulin, Clémentine, Lombard, Fabien, Bourdin, Guillaume, Troublé, Romain, Agostini, Sylvain, Banaigs, Bernard, Boissin, Emilie, Boss, Emmanuel, Bowler, Chris, de Vargas, Colomban, Flores, Michel, Forcioli, Didier, Furla, Paola, Gilson, Eric, Galand, Pierre E., Pesant, Stéphane, Sunagawa, Shinichi, Thomas, Olivier P., Vega Thurber, Rebecca, Voolstra, Christian R., Wincker, Patrick, Zoccola, Didier, Reynaud, Stéphanie
Published 2023

Plankton networks driving carbon export in the oligotrophic ocean

by Guidi, Lionel, Chaffron, Samuel, Bittner, Lucie, Eveillard, Damien, Larhlimi, Abdelhalim, Roux, Simon, Darzi, Youssef, Audic, Stephane, Berline, Léo, Brum, Jennifer, Coelho, Luis Pedro, Espinoza, Julio Cesar Ignacio, Malviya, Shruti, Sunagawa, Shinichi, Dimier, Céline, Kandels-Lewis, Stefanie, Picheral, Marc, Poulain, Julie, Searson, Sarah, Stemmann, Lars, Not, Fabrice, Hingamp, Pascal, Speich, Sabrina, Follows, Mick, Karp-Boss, Lee, Boss, Emmanuel, Ogata, Hiroyuki, Pesant, Stephane, Weissenbach, Jean, Wincker, Patrick, Acinas, Silvia G., Bork, Peer, de Vargas, Colomban, Iudicone, Daniele, Sullivan, Matthew B., Raes, Jeroen, Karsenti, Eric, Bowler, Chris, Gorsky, Gabriel
Published 2016

Diversity of the Pacific Ocean coral reef microbiome

by Galand, Pierre E., Ruscheweyh, Hans-Joachim, Salazar, Guillem, Hochart, Corentin, Henry, Nicolas, Hume, Benjamin C. C., Oliveira, Pedro H., Perdereau, Aude, Labadie, Karine, Belser, Caroline, Boissin, Emilie, Romac, Sarah, Poulain, Julie, Bourdin, Guillaume, Iwankow, Guillaume, Moulin, Clémentine, Armstrong, Eric J., Paz-García, David A., Ziegler, Maren, Agostini, Sylvain, Banaigs, Bernard, Boss, Emmanuel, Bowler, Chris, de Vargas, Colomban, Douville, Eric, Flores, Michel, Forcioli, Didier, Furla, Paola, Gilson, Eric, Lombard, Fabien, Pesant, Stéphane, Reynaud, Stéphanie, Thomas, Olivier P., Troublé, Romain, Zoccola, Didier, Voolstra, Christian R., Thurber, Rebecca Vega, Sunagawa, Shinichi, Wincker, Patrick, Allemand, Denis, Planes, Serge
Published 2023

Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean

by Hochart, Corentin, Paoli, Lucas, Ruscheweyh, Hans-Joachim, Salazar, Guillem, Boissin, Emilie, Romac, Sarah, Poulain, Julie, Bourdin, Guillaume, Iwankow, Guillaume, Moulin, Clémentine, Ziegler, Maren, Porro, Barbara, Armstrong, Eric J., Hume, Benjamin C. C., Aury, Jean-Marc, Pogoreutz, Claudia, Paz-García, David A., Nugues, Maggy M., Agostini, Sylvain, Banaigs, Bernard, Boss, Emmanuel, Bowler, Chris, de Vargas, Colomban, Douville, Eric, Flores, Michel, Forcioli, Didier, Furla, Paola, Gilson, Eric, Lombard, Fabien, Pesant, Stéphane, Reynaud, Stéphanie, Thomas, Olivier P., Troublé, Romain, Wincker, Patrick, Zoccola, Didier, Allemand, Denis, Planes, Serge, Thurber, Rebecca Vega, Voolstra, Christian R., Sunagawa, Shinichi, Galand, Pierre E.
Published 2023

Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean

by Armstrong, Eric J., Lê-Hoang, Julie, Carradec, Quentin, Aury, Jean-Marc, Noel, Benjamin, Hume, Benjamin C. C., Voolstra, Christian R., Poulain, Julie, Belser, Caroline, Paz-García, David A., Cruaud, Corinne, Labadie, Karine, Da Silva, Corinne, Moulin, Clémentine, Boissin, Emilie, Bourdin, Guillaume, Iwankow, Guillaume, Romac, Sarah, Agostini, Sylvain, Banaigs, Bernard, Boss, Emmanuel, Bowler, Chris, de Vargas, Colomban, Douville, Eric, Flores, Michel, Forcioli, Didier, Furla, Paola, Galand, Pierre E., Gilson, Eric, Lombard, Fabien, Pesant, Stéphane, Reynaud, Stéphanie, Sullivan, Matthew B., Sunagawa, Shinichi, Thomas, Olivier P., Troublé, Romain, Thurber, Rebecca Vega, Zoccola, Didier, Planes, Serge, Allemand, Denis, Wincker, Patrick
Published 2023

Pervasive tandem duplications and convergent evolution shape coral genomes

by Noel, Benjamin, Denoeud, France, Rouan, Alice, Buitrago-López, Carol, Capasso, Laura, Poulain, Julie, Boissin, Emilie, Pousse, Mélanie, Da Silva, Corinne, Couloux, Arnaud, Armstrong, Eric, Carradec, Quentin, Cruaud, Corinne, Labadie, Karine, Lê-Hoang, Julie, Tambutté, Sylvie, Barbe, Valérie, Moulin, Clémentine, Bourdin, Guillaume, Iwankow, Guillaume, Romac, Sarah, Agostini, Sylvain, Banaigs, Bernard, Boss, Emmanuel, Bowler, Chris, de Vargas, Colomban, Douville, Eric, Flores, J. Michel, Forcioli, Didier, Furla, Paola, Galand, Pierre E., Lombard, Fabien, Pesant, Stéphane, Reynaud, Stéphanie, Sullivan, Matthew B., Sunagawa, Shinichi, Thomas, Olivier P., Troublé, Romain, Thurber, Rebecca Vega, Allemand, Denis, Planes, Serge, Gilson, Eric, Zoccola, Didier, Wincker, Patrick, Voolstra, Christian R., Aury, Jean-Marc
Published 2023