Network analysis identifies Rv0324 and Rv0880 as regulators of bedaquiline tolerance in Mycobacterium tuberculosis

por Peterson, Eliza J.R., Ma, Shuyi, Sherman, David R., Baliga, Nitin S.
Publicado 2016

PerSort Facilitates Characterization and Elimination of Persister Subpopulation in Mycobacteria

por Srinivas, Vivek, Arrieta-Ortiz, Mario L., Kaur, Amardeep, Peterson, Eliza J. R., Baliga, Nitin S.
Publicado 2020

Mycobacterium abscessus biofilms produce an extracellular matrix and have a distinct mycolic acid profile

por Dokic, Anja, Peterson, Eliza, Arrieta-Ortiz, Mario L., Pan, Min, Di Maio, Alessandro, Baliga, Nitin, Bhatt, Apoorva
Publicado 2021

Transcriptome signature of cell viability predicts drug response and drug interaction in Mycobacterium tuberculosis

por Srinivas, Vivek, Ruiz, Rene A., Pan, Min, Immanuel, Selva Rupa Christinal, Peterson, Eliza J.R., Baliga, Nitin S.
Publicado 2021

Biofilms of the non-tuberculous Mycobacterium chelonae form an extracellular matrix and display distinct expression patterns

por Vega-Dominguez, Perla, Peterson, Eliza, Pan, Min, Di Maio, Alessandro, Singh, Saumya, Umapathy, Siva, Saini, Deepak K., Baliga, Nitin, Bhatt, Apoorva
Publicado 2020

A systems-level gene regulatory network model for Plasmodium falciparum

por Neal, Maxwell L, Wei, Ling, Peterson, Eliza, Arrieta-Ortiz, Mario L, Danziger, Samuel A, Baliga, Nitin S, Kaushansky, Alexis, Aitchison, John D
Publicado 2021

MadR mediates acyl CoA-dependent regulation of mycolic acid desaturation in mycobacteria

por Cooper, Charlotte, Peterson, Eliza J. R., Bailo, Rebeca, Pan, Min, Singh, Albel, Moynihan, Patrick, Nakaya, Makoto, Fujiwara, Nagatoshi, Baliga, Nitin, Bhatt, Apoorva
Publicado 2022

Quantitative prediction of conditional vulnerabilities in regulatory and metabolic networks using PRIME

por Immanuel, Selva Rupa Christinal, Arrieta-Ortiz, Mario L., Ruiz, Rene A., Pan, Min, Lopez Garcia de Lomana, Adrian, Peterson, Eliza J. R., Baliga, Nitin S.
Publicado 2021

Intricate Genetic Programs Controlling Dormancy in Mycobacterium tuberculosis

por Peterson, Eliza J.R., Abidi, Abrar A., Arrieta-Ortiz, Mario L., Aguilar, Boris, Yurkovich, James T., Kaur, Amardeep, Pan, Min, Srinivas, Vivek, Shmulevich, Ilya, Baliga, Nitin S.
Publicado 2020

Intricate Genetic Programs Controlling Dormancy in Mycobacterium tuberculosis

por Peterson, Eliza J.R., Abidi, Abrar A., Arrieta-Ortiz, Mario L., Aguilar, Boris, Yurkovich, James T., Kaur, Amardeep, Pan, Min, Srinivas, Vivek, Shmulevich, Ilya, Baliga, Nitin S.
Publicado 2021

A high-resolution network model for global gene regulation in Mycobacterium tuberculosis

por Peterson, Eliza J.R., Reiss, David J., Turkarslan, Serdar, Minch, Kyle J., Rustad, Tige, Plaisier, Christopher L., Longabaugh, William J.R., Sherman, David R., Baliga, Nitin S.
Publicado 2014

A comprehensive map of genome-wide gene regulation in Mycobacterium tuberculosis

por Turkarslan, Serdar, Peterson, Eliza J R, Rustad, Tige R, Minch, Kyle J, Reiss, David J, Morrison, Robert, Ma, Shuyi, Price, Nathan D, Sherman, David R, Baliga, Nitin S
Publicado 2015

Path‐seq identifies an essential mycolate remodeling program for mycobacterial host adaptation

por Peterson, Eliza JR, Bailo, Rebeca, Rothchild, Alissa C, Arrieta‐Ortiz, Mario L, Kaur, Amardeep, Pan, Min, Mai, Dat, Abidi, Abrar A, Cooper, Charlotte, Aderem, Alan, Bhatt, Apoorva, Baliga, Nitin S
Publicado 2019

MtrA modulates Mycobacterium tuberculosis cell division in host microenvironments to mediate intrinsic resistance and drug tolerance

por Peterson, Eliza J.R., Brooks, Aaron N., Reiss, David J., Kaur, Amardeep, Do, Julie, Pan, Min, Wu, Wei-Ju, Morrison, Robert, Srinivas, Vivek, Carter, Warren, Arrieta-Ortiz, Mario L., Ruiz, Rene A., Bhatt, Apoorva, Baliga, Nitin S.
Publicado 2023

The BCGΔBCG1419c Vaccine Candidate Reduces Lung Pathology, IL-6, TNF-α, and IL-10 During Chronic TB Infection

por Flores-Valdez, Mario A., Pedroza-Roldán, César, Aceves-Sánchez, Michel de Jesús, Peterson, Eliza J. R., Baliga, Nitin S., Hernández-Pando, Rogelio, Troudt, JoLynn, Creissen, Elizabeth, Izzo, Linda, Bielefeldt-Ohmann, Helle, Bickett, Thomas, Izzo, Angelo A.
Publicado 2018

The DNA-binding network of Mycobacterium tuberculosis

por Minch, Kyle J., Rustad, Tige R., Peterson, Eliza J. R., Winkler, Jessica, Reiss, David J., Ma, Shuyi, Hickey, Mark, Brabant, William, Morrison, Bob, Turkarslan, Serdar, Mawhinney, Chris, Galagan, James E., Price, Nathan D., Baliga, Nitin S., Sherman, David R.
Publicado 2015

Transcriptional portrait of M. bovis BCG during biofilm production shows genes differentially expressed during intercellular aggregation and substrate attachment

por Flores-Valdez, Mario Alberto, Aceves-Sánchez, Michel de Jesús, Peterson, Eliza J. R., Baliga, Nitin, Bravo-Madrigal, Jorge, De la Cruz-Villegas, Miguel Ángel, Ares, Miguel A., Born, Sarah, Voskuil, Martin, Pérez-Padilla, Nayeli Areli, Burciaga-Flores, Mirna, Camacho-Villegas, Tanya Amanda, Espinoza-Jorge, María Guadalupe
Publicado 2020

Mathematical models to study the biology of pathogens and the infectious diseases they cause

por Xavier, Joao B., Monk, Jonathan M., Poudel, Saugat, Norsigian, Charles J., Sastry, Anand V., Liao, Chen, Bento, Jose, Suchard, Marc A., Arrieta-Ortiz, Mario L., Peterson, Eliza J.R., Baliga, Nitin S., Stoeger, Thomas, Ruffin, Felicia, Richardson, Reese A.K., Gao, Catherine A., Horvath, Thomas D., Haag, Anthony M., Wu, Qinglong, Savidge, Tor, Yeaman, Michael R.
Publicado 2022