Perturbation-based analysis and modeling of combinatorial regulation in the yeast sulfur assimilation pathway

por McIsaac, R. Scott, Petti, Allegra A., Bussemaker, Harmen J., Botstein, David
Publicado 2012

Combinatorial control of diverse metabolic and physiological functions by transcriptional regulators of the yeast sulfur assimilation pathway

por Petti, Allegra A., McIsaac, R. Scott, Ho-Shing, Olivia, Bussemaker, Harmen J., Botstein, David
Publicado 2012

pVAC-Seq: A genome-guided in silico approach to identifying tumor neoantigens

por Hundal, Jasreet, Carreno, Beatriz M., Petti, Allegra A., Linette, Gerald P., Griffith, Obi L., Mardis, Elaine R., Griffith, Malachi
Publicado 2016

Coordinated regulation of sulfur and phospholipid metabolism reflects the importance of methylation in the growth of yeast

por Hickman, Mark J., Petti, Allegra A., Ho-Shing, Olivia, Silverman, Sanford J., McIsaac, R. Scott, Lee, Traci A., Botstein, David
Publicado 2011

Fast-acting and nearly gratuitous induction of gene expression and protein depletion in Saccharomyces cerevisiae

por McIsaac, R. Scott, Silverman, Sanford J., McClean, Megan N., Gibney, Patrick A., Macinskas, Joanna, Hickman, Mark J., Petti, Allegra A., Botstein, David
Publicado 2011

Focused Ultrasound-enabled Brain Tumor Liquid Biopsy

por Zhu, Lifei, Cheng, Galen, Ye, Dezhuang, Nazeri, Arash, Yue, Yimei, Liu, Weijun, Wang, Xiaowei, Dunn, Gavin P., Petti, Allegra A., Leuthardt, Eric C., Chen, Hong
Publicado 2018

Recurrent transcriptional responses in AML and MDS patients treated with decitabine

por Upadhyay, Pawan, Beales, Jeremy, Shah, Nakul M., Gruszczynska, Agata, Miller, Christopher A., Petti, Allegra A., Ramakrishnan, Sai Mukund, Link, Daniel C., Ley, Timothy J., Welch, John S.
Publicado 2022

A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

por Petti, Allegra A., Williams, Stephen R., Miller, Christopher A., Fiddes, Ian T., Srivatsan, Sridhar N., Chen, David Y., Fronick, Catrina C., Fulton, Robert S., Church, Deanna M., Ley, Timothy J.
Publicado 2019

Author Correction: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

por Petti, Allegra A., Williams, Stephen R., Miller, Christopher A., Fiddes, Ian T., Srivatsan, Sridhar N., Chen, David Y., Fronick, Catrina C., Fulton, Robert S., Church, Deanna M., Ley, Timothy J.
Publicado 2022

Competitive binding of E3 ligases TRIM26 and WWP2 controls SOX2 in glioblastoma

por Mahlokozera, Tatenda, Patel, Bhuvic, Chen, Hao, Desouza, Patrick, Qu, Xuan, Mao, Diane D., Hafez, Daniel, Yang, Wei, Taiwo, Rukayat, Paturu, Mounica, Salehi, Afshin, Gujar, Amit D., Dunn, Gavin P., Mosammaparast, Nima, Petti, Allegra A., Yano, Hiroko, Kim, Albert H.
Publicado 2021

Genetic and Transcriptional Contributions to Relapse in Normal Karyotype Acute Myeloid Leukemia

por Petti, Allegra A., Khan, Saad M., Xu, Ziheng, Helton, Nichole, Fronick, Catrina C., Fulton, Robert, Ramakrishnan, Sai M., Nonavinkere Srivatsan, Sridhar, Heath, Sharon E., Westervelt, Peter, Payton, Jacqueline E., Walter, Matthew J., Link, Daniel C., DiPersio, John, Miller, Christopher, Ley, Timothy J.
Publicado 2022

Remethylation of Dnmt3a(−/−) hematopoietic cells is associated with partial correction of gene dysregulation and reduced myeloid skewing

por Ketkar, Shamika, Verdoni, Angela M., Smith, Amanda M., Bangert, Celia V., Leight, Elizabeth R., Chen, David Y., Brune, Meryl K., Helton, Nichole M., Hoock, Mieke, George, Daniel R., Fronick, Catrina, Fulton, Robert S., Ramakrishnan, Sai Mukund, Chang, Gue Su, Petti, Allegra A., Spencer, David H., Miller, Christopher A., Ley, Timothy J.
Publicado 2020

Single-cell profiling of human dura and meningioma reveals cellular meningeal landscape and insights into meningioma immune response

por Wang, Anthony Z., Bowman-Kirigin, Jay A., Desai, Rupen, Kang, Liang-I, Patel, Pujan R., Patel, Bhuvic, Khan, Saad M., Bender, Diane, Marlin, M. Caleb, Liu, Jingxian, Osbun, Joshua W., Leuthardt, Eric C., Chicoine, Michael R., Dacey, Ralph G., Zipfel, Gregory J., Kim, Albert H., DeNardo, David G., Petti, Allegra A., Dunn, Gavin P.
Publicado 2022

T-BET and EOMES sustain mature human NK cell identity and antitumor function

por Wong, Pamela, Foltz, Jennifer A., Chang, Lily, Neal, Carly C., Yao, Tony, Cubitt, Celia C., Tran, Jennifer, Kersting-Schadek, Samantha, Palakurty, Sathvik, Jaeger, Natalia, Russler-Germain, David A., Marin, Nancy D., Gang, Margery, Wagner, Julia A., Zhou, Alice Y., Jacobs, Miriam T., Foster, Mark, Schappe, Timothy, Marsala, Lynne, McClain, Ethan, Pence, Patrick, Becker-Hapak, Michelle, Fisk, Bryan, Petti, Allegra A., Griffith, Obi L., Griffith, Malachi, Berrien-Elliott, Melissa M., Fehniger, Todd A.
Publicado 2023