A numerical similarity approach for using retired Current Procedural Terminology (CPT) codes for electronic phenotyping in the Scalable Collaborative Infrastructure for a Learning...

por Klann, Jeffrey G., Phillips, Lori C., Turchin, Alexander, Weiler, Sarah, Mandl, Kenneth D., Murphy, Shawn N.
Publicado 2015

Using metatranscriptomics to better understand the role of microbial nitrogen cycling in coastal sediment benthic flux denitrification efficiency

por Marshall, Alexis J., Phillips, Lori, Longmore, Andrew, Hayden, Helen L., Tang, Caixian, Heidelberg, Karla B., Mele, Pauline
Publicado 2023

Combining clinical and genomics queries using i2b2 – Three methods

por Murphy, Shawn N., Avillach, Paul, Bellazzi, Riccardo, Phillips, Lori, Gabetta, Matteo, Eran, Alal, McDuffie, Michael T., Kohane, Isaac S.
Publicado 2017

Web services for data warehouses: OMOP and PCORnet on i2b2

por Klann, Jeffrey G, Phillips, Lori C, Herrick, Christopher, Joss, Matthew A H, Wagholikar, Kavishwar B, Murphy, Shawn N
Publicado 2018

MHC Mismatch Inhibits Neurogenesis and Neuron Maturation in Stem Cell Allografts

por Chen, Zhiguo, Phillips, Lori K., Gould, Elizabeth, Campisi, Jay, Lee, Star W., Ormerod, Brandi K., Zwierzchoniewska, Monika, Martinez, Olivia M., Palmer, Theo D.
Publicado 2011

Long insert whole genome sequencing for copy number variant and translocation detection

por Liang, Winnie S., Aldrich, Jessica, Tembe, Waibhav, Kurdoglu, Ahmet, Cherni, Irene, Phillips, Lori, Reiman, Rebecca, Baker, Angela, Weiss, Glen J., Carpten, John D., Craig, David W.
Publicado 2014

A transcriptomics approach uncovers novel roles for poly(ADP-ribosyl)ation in the basal defense response in Arabidopsis thaliana

por Briggs, Amy G., Adams-Phillips, Lori C., Keppler, Brian D., Zebell, Sophia G., Arend, Kyle C., Apfelbaum, April A., Smith, Joshua A., Bent, Andrew F.
Publicado 2017

Paired Tumor and Normal Whole Genome Sequencing of Metastatic Olfactory Neuroblastoma

por Weiss, Glen J., Liang, Winnie S., Izatt, Tyler, Arora, Shilpi, Cherni, Irene, Raju, Robert N., Hostetter, Galen, Kurdoglu, Ahmet, Christoforides, Alexis, Sinari, Shripad, Baker, Angela S., Metpally, Raghu, Tembe, Waibhav D., Phillips, Lori, Von Hoff, Daniel D., Craig, David W., Carpten, John D.
Publicado 2012

Whole genome sequencing reveals potential targets for therapy in patients with refractory KRAS mutated metastatic colorectal cancer

por Shanmugam, Vijayalakshmi, Ramanathan, Ramesh K, Lavender, Nicole A, Sinari, Shripad, Chadha, Manpreet, Liang, Winnie S, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Benson, Hollie, Phillips, Lori, Baker, Angela, Murray, Christopher, Hostetter, Galen, Von Hoff, Daniel D, Craig, David W, Carpten, John D
Publicado 2014

A Pilot Study Using Next-Generation Sequencing in Advanced Cancers: Feasibility and Challenges

por Weiss, Glen J., Liang, Winnie S., Demeure, Michael J., Kiefer, Jeff A., Hostetter, Galen, Izatt, Tyler, Sinari, Shripad, Christoforides, Alexis, Aldrich, Jessica, Kurdoglu, Ahmet, Phillips, Lori, Benson, Hollie, Reiman, Rebecca, Baker, Angela, Marsh, Vickie, Von Hoff, Daniel D., Carpten, John D., Craig, David W.
Publicado 2013

Simultaneous Characterization of Somatic Events and HPV-18 Integration in a Metastatic Cervical Carcinoma Patient Using DNA and RNA Sequencing

por Liang, Winnie S., Aldrich, Jessica, Nasser, Sara, Kurdoglu, Ahmet, Phillips, Lori, Reiman, Rebecca, McDonald, Jacquelyn, Izatt, Tyler, Christoforides, Alexis, Baker, Angela, Craig, Christine, Egan, Jan B., Chase, Dana M., Farley, John H., Bryce, Alan H., Stewart, A. Keith, Borad, Mitesh J., Carpten, John D., Craig, David W., Monk, Bradley J.
Publicado 2014

Genome-Wide Characterization of Pancreatic Adenocarcinoma Patients Using Next Generation Sequencing

por Liang, Winnie S., Craig, David W., Carpten, John, Borad, Mitesh J., Demeure, Michael J., Weiss, Glen J., Izatt, Tyler, Sinari, Shripad, Christoforides, Alexis, Aldrich, Jessica, Kurdoglu, Ahmet, Barrett, Michael, Phillips, Lori, Benson, Hollie, Tembe, Waibhav, Braggio, Esteban, Kiefer, Jeffrey A., Legendre, Christophe, Posner, Richard, Hostetter, Galen H., Baker, Angela, Egan, Jan B., Han, Haiyong, Lake, Douglas, Stites, Edward C., Ramanathan, Ramesh K., Fonseca, Rafael, Stewart, A. Keith, Von Hoff, Daniel
Publicado 2012

The founding charter of the Omic Biodiversity Observation Network (Omic BON)

por Meyer, Raïssa, Davies, Neil, Pitz, Kathleen J, Meyer, Chris, Samuel, Robyn, Anderson, Jane, Appeltans, Ward, Barker, Katharine, Chavez, Francisco P, Duffy, J Emmett, Goodwin, Kelly D, Hudson, Maui, Hunter, Margaret E, Karstensen, Johannes, Laney, Christine M, Leinen, Margaret, Mabee, Paula, Macklin, James A, Muller-Karger, Frank, Pade, Nicolas, Pearlman, Jay, Phillips, Lori, Provoost, Pieter, Santi, Ioulia, Schigel, Dmitry, Schriml, Lynn M, Soccodato, Alice, Suominen, Saara, Thibault, Katherine M, Ung, Visotheary, van de Kamp, Jodie, Wallis, Elycia, Walls, Ramona, Buttigieg, Pier Luigi
Publicado 2023

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

por Bissett, Andrew, Fitzgerald, Anna, Meintjes, Thys, Mele, Pauline M., Reith, Frank, Dennis, Paul G., Breed, Martin F., Brown, Belinda, Brown, Mark V., Brugger, Joel, Byrne, Margaret, Caddy-Retalic, Stefan, Carmody, Bernie, Coates, David J., Correa, Carolina, Ferrari, Belinda C., Gupta, Vadakattu V. S. R., Hamonts, Kelly, Haslem, Asha, Hugenholtz, Philip, Karan, Mirko, Koval, Jason, Lowe, Andrew J., Macdonald, Stuart, McGrath, Leanne, Martin, David, Morgan, Matt, North, Kristin I., Paungfoo-Lonhienne, Chanyarat, Pendall, Elise, Phillips, Lori, Pirzl, Rebecca, Powell, Jeff R., Ragan, Mark A., Schmidt, Susanne, Seymour, Nicole, Snape, Ian, Stephen, John R., Stevens, Matthew, Tinning, Matt, Williams, Kristen, Yeoh, Yun Kit, Zammit, Carla M., Young, Andrew
Publicado 2016

Erratum to: Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

por Bissett, Andrew, Fitzgerald, Anna, Court, Leon, Meintjes, Thys, Mele, Pauline M., Reith, Frank, Dennis, Paul G., Breed, Martin F., Brown, Belinda, Brown, Mark V., Brugger, Joel, Byrne, Margaret, Caddy-Retalic, Stefan, Carmody, Bernie, Coates, David J., Correa, Carolina, Ferrari, Belinda C., Gupta, Vadakattu V. S. R., Hamonts, Kelly, Haslem, Asha, Hugenholtz, Philip, Karan, Mirko, Koval, Jason, Lowe, Andrew J., Macdonald, Stuart, McGrath, Leanne, Martin, David, Morgan, Matt, North, Kristin I., Paungfoo-Lonhienne, Chanyarat, Pendall, Elise, Phillips, Lori, Pirzl, Rebecca, Powell, Jeff R., Ragan, Mark A., Schmidt, Susanne, Seymour, Nicole, Snape, Ian, Stephen, John R., Stevens, Matthew, Tinning, Matt, Williams, Kristen, Yeoh, Yun Kit, Zammit, Carla M., Young, Andrew
Publicado 2017

Integrated Genomic Characterization Reveals Novel, Therapeutically Relevant Drug Targets in FGFR and EGFR Pathways in Sporadic Intrahepatic Cholangiocarcinoma

por Borad, Mitesh J., Champion, Mia D., Egan, Jan B., Liang, Winnie S., Fonseca, Rafael, Bryce, Alan H., McCullough, Ann E., Barrett, Michael T., Hunt, Katherine, Patel, Maitray D., Young, Scott W., Collins, Joseph M., Silva, Alvin C., Condjella, Rachel M., Block, Matthew, McWilliams, Robert R., Lazaridis, Konstantinos N., Klee, Eric W., Bible, Keith C., Harris, Pamela, Oliver, Gavin R., Bhavsar, Jaysheel D., Nair, Asha A., Middha, Sumit, Asmann, Yan, Kocher, Jean-Pierre, Schahl, Kimberly, Kipp, Benjamin R., Barr Fritcher, Emily G., Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Phillips, Lori, McDonald, Jackie, Adkins, Jonathan, Mastrian, Stephen D., Placek, Pamela, Watanabe, Aprill T., LoBello, Janine, Han, Haiyong, Von Hoff, Daniel, Craig, David W., Stewart, A. Keith, Carpten, John D.
Publicado 2014