G-SAIP: Graphical Sequence Alignment Through Parallel Programming in the Post-Genomic Era

por Piña, Johan S., Orozco-Arias, Simon, Tobón-Orozco, Nicolas, Camargo-Forero, Leonardo, Tabares-Soto, Reinel, Guyot, Romain
Publicado 2023

TIP_finder: An HPC Software to Detect Transposable Element Insertion Polymorphisms in Large Genomic Datasets

por Orozco-Arias, Simon, Tobon-Orozco, Nicolas, Piña, Johan S., Jiménez-Varón, Cristian Felipe, Tabares-Soto, Reinel, Guyot, Romain
Publicado 2020

K-mer-based machine learning method to classify LTR-retrotransposons in plant genomes

por Orozco-Arias, Simon, Candamil-Cortés, Mariana S., Jaimes, Paula A., Piña, Johan S., Tabares-Soto, Reinel, Guyot, Romain, Isaza, Gustavo
Publicado 2021

PredictION: a predictive model to establish the performance of Oxford sequencing reads of SARS-CoV-2

por Valencia-Valencia, David E., Lopez-Alvarez, Diana, Rivera-Franco, Nelson, Castillo, Andres, Piña, Johan S., Pardo, Carlos A., Parra, Beatriz
Publicado 2022

Genomic object detection: An improved approach for transposable elements detection and classification using convolutional neural networks

por Orozco-Arias, Simon, Lopez-Murillo, Luis Humberto, Piña, Johan S., Valencia-Castrillon, Estiven, Tabares-Soto, Reinel, Castillo-Ossa, Luis, Isaza, Gustavo, Guyot, Romain
Publicado 2023