Identifier Mapping in Cytoscape

por Treister, Adam, Pico, Alexander R.
Publicado 2018

Introducing R as a smart version of calculators enables beginners to explore it on their own

por Choudhary, Krishna, Pico, Alexander R.
Publicado 2022

Using published pathway figures in enrichment analysis and machine learning

por Shin, Min-Gyoung, Pico, Alexander R.
Publicado 2023

WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization

por Kutmon, Martina, Lotia, Samad, Evelo, Chris T, Pico, Alexander R
Publicado 2014

Finding the Right Questions: Exploratory Pathway Analysis to Enhance Biological Discovery in Large Datasets

por Kelder, Thomas, Conklin, Bruce R., Evelo, Chris T., Pico, Alexander R.
Publicado 2010

Pathway information extracted from 25 years of pathway figures

por Hanspers, Kristina, Riutta, Anders, Summer-Kutmon, Martina, Pico, Alexander R.
Publicado 2020

enhancedGraphics: a Cytoscape app for enhanced node graphics

por Morris, John H., Kuchinsky, Allan, Ferrin, Thomas E., Pico, Alexander R.
Publicado 2014

Research synergy and drug development: Bright stars in neighboring constellations

por Keserci, Samet, Livingston, Eric, Wan, Lingtian, Pico, Alexander R., Chacko, George
Publicado 2017

Cytoscape App Store

por Lotia, Samad, Montojo, Jason, Dong, Yue, Bader, Gary D., Pico, Alexander R.
Publicado 2013

PSFC: a Pathway Signal Flow Calculator App for Cytoscape

por Nersisyan, Lilit, Johnson, Graham, Riel-Mehan, Megan, Pico, Alexander R, Arakelyan, Arsen
Publicado 2017

Cytoscape Automation: empowering workflow-based network analysis

por Otasek, David, Morris, John H., Bouças, Jorge, Pico, Alexander R., Demchak, Barry
Publicado 2019

RCy3: Network biology using Cytoscape from within R

por Gustavsen, Julia A., Pai, Shraddha, Isserlin, Ruth, Demchak, Barry, Pico, Alexander R.
Publicado 2019

Mosaic: making biological sense of complex networks

por Zhang, Chao, Hanspers, Kristina, Kuchinsky, Allan, Salomonis, Nathan, Xu, Dong, Pico, Alexander R.
Publicado 2012

NOA: a cytoscape plugin for network ontology analysis

por Zhang, Chao, Wang, Jiguang, Hanspers, Kristina, Xu, Dong, Chen, Luonan, Pico, Alexander R.
Publicado 2013

CyAnimator: Simple Animations of Cytoscape Networks

por Morris, John H., Vijay, Dhameliya, Federowicz, Steven, Pico, Alexander R., Ferrin, Thomas E.
Publicado 2015

WikiPathways: Pathway Editing for the People

por Pico, Alexander R, Kelder, Thomas, van Iersel, Martijn P, Hanspers, Kristina, Conklin, Bruce R, Evelo, Chris
Publicado 2008

Mining Biological Pathways Using WikiPathways Web Services

por Kelder, Thomas, Pico, Alexander R., Hanspers, Kristina, van Iersel, Martijn P., Evelo, Chris, Conklin, Bruce R.
Publicado 2009

Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources

por Waagmeester, Andra, Kutmon, Martina, Riutta, Anders, Miller, Ryan, Willighagen, Egon L., Evelo, Chris T., Pico, Alexander R.
Publicado 2016

setsApp for Cytoscape: Set operations for Cytoscape Nodes and Edges

por Morris, John H., Lotia, Samad, Wu, Allan, Doncheva, Nadezhda T., Albrecht, Mario, Pico, Alexander R., Ferrin, Thomas E
Publicado 2015

PathVisio 3: An Extendable Pathway Analysis Toolbox

por Kutmon, Martina, van Iersel, Martijn P., Bohler, Anwesha, Kelder, Thomas, Nunes, Nuno, Pico, Alexander R., Evelo, Chris T.
Publicado 2015