Application of information theoretical approaches to assess diversity and similarity in single-cell transcriptomics

por Seweryn, Michal T., Pietrzak, Maciej, Ma, Qin
Publicado 2020

Diet-Induced Gene Expression Changes of Cachectic Muscle, Adipose, and Liver

por Angelotti, Austin, Cole, Rachel, Webb, Amy, Pietrzak, Maciej, Belury, Martha
Publicado 2022

Epigenetic Silencing of Nucleolar rRNA Genes in Alzheimer's Disease

por Pietrzak, Maciej, Rempala, Grzegorz, Nelson, Peter T., Zheng, Jing-Juan, Hetman, Michal
Publicado 2011

High dimensional model representation of log-likelihood ratio: binary classification with expression data

por Foroughi pour, Ali, Pietrzak, Maciej, Dalton, Lori A, Rempała, Grzegorz A.
Publicado 2020

BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation

por Gadepalli, Venkat Sundar, Ozer, Hatice Gulcin, Yilmaz, Ayse Selen, Pietrzak, Maciej, Webb, Amy
Publicado 2019

Differences in Expression Level of Helios and Neuropilin-1 Do Not Distinguish Thymus-Derived from Extrathymically-Induced CD4(+)Foxp3(+) Regulatory T Cells

por Szurek, Edyta, Cebula, Anna, Wojciech, Lukasz, Pietrzak, Maciej, Rempala, Grzegorz, Kisielow, Pawel, Ignatowicz, Leszek
Publicado 2015

Anti-GITR Antibody Treatment Increases TCR Repertoire Diversity of Regulatory but not Effector T Cells Engaged in the Immune Response Against B16 Melanoma

por Scirka, Bozena, Szurek, Edyta, Pietrzak, Maciej, Rempala, Grzegorz, Kisielow, Pawel, Ignatowicz, Leszek, Miazek, Arkadiusz
Publicado 2017

Use of CRISPR/Cas9 with homology-directed repair to silence the human topoisomerase IIα intron-19 5’ splice site: Generation of etoposide resistance in human leukemia K562 cells

por Hernandez, Victor A., Carvajal-Moreno, Jessika, Wang, Xinyi, Pietrzak, Maciej, Yalowich, Jack C., Elton, Terry S.
Publicado 2022

Non-canonicaly recruited TCRαβCD8αα IELs recognize microbial antigens

por Wojciech, Lukasz, Szurek, Edyta, Kuczma, Michal, Cebula, Anna, Elhefnawy, Wessam R., Pietrzak, Maciej, Rempala, Grzegorz, Ignatowicz, Leszek
Publicado 2018

High dimensional model representation of log likelihood ratio: binary classification with SNP data

por pour, Ali Foroughi, Pietrzak, Maciej, Sucheston-Campbell, Lara E., Karaesmen, Ezgi, Dalton, Lori A., Rempała, Grzegorz A.
Publicado 2020

Dormant pathogenic CD4(+) T cells are prevalent in the peripheral repertoire of healthy mice

por Cebula, Anna, Kuczma, Michal, Szurek, Edyta, Pietrzak, Maciej, Savage, Natasha, Elhefnawy, Wessam R., Rempala, Grzegorz, Kraj, Piotr, Ignatowicz, Leszek
Publicado 2019

A nested case-control study of 277 prediagnostic serum cytokines and glioma

por Schwartzbaum, Judith, Wang, Min, Root, Elisabeth, Pietrzak, Maciej, Rempala, Grzegorz A., Huang, Ruo-Pan, Johannesen, Tom Borge, Grimsrud, Tom K.
Publicado 2017

Self and microbiota-derived epitopes induce CD4(+) T cell anergy and conversion into CD4(+)Foxp3(+) regulatory cells

por Kuczma, Michal P., Szurek, Edyta A., Cebula, Anna, Ngo, Vu L., Pietrzak, Maciej, Kraj, Piotr, Denning, Timothy L., Ignatowicz, Leszek
Publicado 2020

STAT1 is regulated by TRIM24 and promotes immunosuppression in head and neck squamous carcinoma cells, but enhances T cell antitumour immunity in the tumour microenvironment

por Anderson, Kelvin, Ryan, Nathan, Nedungadi, Divya, Lamenza, Felipe, Swingler, Michael, Siddiqui, Arham, Satoskar, Abhay, Upadhaya, Puja, Pietrzak, Maciej, Oghumu, Steve
Publicado 2022

Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs)

por Handelman, Samuel K, Seweryn, Michal, Smith, Ryan M, Hartmann, Katherine, Wang, Danxin, Pietrzak, Maciej, Johnson, Andrew D, Kloczkowski, Andrzej, Sadee, Wolfgang
Publicado 2015

graph-GPA 2.0: improving multi-disease genetic analysis with integration of functional annotation data

por Deng, Qiaolan, Gupta, Arkobrato, Jeon, Hyeongseon, Nam, Jin Hyun, Yilmaz, Ayse Selen, Chang, Won, Pietrzak, Maciej, Li, Lang, Kim, Hang J., Chung, Dongjun
Publicado 2023

Allele-Selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-Coding and Noncoding RNAs, and RNA Isoforms

por Mascarenhas, Roshan, Pietrzak, Maciej, Smith, Ryan M., Webb, Amy, Wang, Danxin, Papp, Audrey C., Pinsonneault, Julia K., Seweryn, Michal, Rempala, Grzegorz, Sadee, Wolfgang
Publicado 2015

Tgfbr2 in Dental Pulp Cells Guides Neurite Outgrowth in Developing Teeth

por Stanwick, Monica, Barkley, Courtney, Serra, Rosa, Kruggel, Andrew, Webb, Amy, Zhao, Yue, Pietrzak, Maciej, Ashman, Chandler, Staats, Allie, Shahid, Shifa, Peters, Sarah B.
Publicado 2022

AmpliSeq transcriptome analysis of human alveolar and monocyte-derived macrophages over time in response to Mycobacterium tuberculosis infection

por Papp, Audrey C., Azad, Abul K., Pietrzak, Maciej, Williams, Amanda, Handelman, Samuel K., Igo, Robert P., Stein, Catherine M., Hartmann, Katherine, Schlesinger, Larry S., Sadee, Wolfgang
Publicado 2018

COVID-19 Booster Uptake among First Responders and Their Household Members May Be Lower than Anticipated

por Frey, Jennifer A., Bachmann, Daniel J., Anghelina, Mirela, Sircelj, Valerie, Saadoon, Osama, Stevens, Patrick, Pietrzak, Maciej, Fernández, Soledad, McAlearney, Ann Scheck, Panchal, Ashish R.
Publicado 2022