Simple topological properties predict functional misannotations in a metabolic network

por Liberal, Rodrigo, Pinney, John W.
Publicado 2013

Evolving proteins at Darwin's bicentenary

por Pinney, John W, Stumpf, Michael PH
Publicado 2009

Making the right connections: biological networks in the light of evolution

por Knight, Christopher G, Pinney, John W
Publicado 2009

Protein–Protein Interactions in Virus–Host Systems

por Brito, Anderson F., Pinney, John W.
Publicado 2017

The evolution of protein domain repertoires: Shedding light on the origins of the Herpesviridae family

por Brito, Anderson F, Pinney, John W
Publicado 2020

The biological context of HIV-1 host interactions reveals subtle insights into a system hijack

por Dickerson, Jonathan E, Pinney, John W, Robertson, David L
Publicado 2010

AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response

por Bryant, William A, Sternberg, Michael JE, Pinney, John W
Publicado 2013

JNets: Exploring networks by integrating annotation

por MacPherson, Jamie I, Pinney, John W, Robertson, David L
Publicado 2009

Derivative processes for modelling metabolic fluxes

por Žurauskienė, Justina, Kirk, Paul, Thorne, Thomas, Pinney, John, Stumpf, Michael
Publicado 2014

PathwayBooster: a tool to support the curation of metabolic pathways

por Liberal, Rodrigo, Lisowska, Beata K, Leak, David J, Pinney, John W
Publicado 2015

metaSHARK: a WWW platform for interactive exploration of metabolic networks

por Hyland, Christopher, Pinney, John W., McConkey, Glenn A., Westhead, David R.
Publicado 2006

Heat Stress Enhances the Accumulation of Polyadenylated Mitochondrial Transcripts in Arabidopsis thaliana

por Adamo, Alessio, Pinney, John W., Kunova, Andrea, Westhead, David R., Meyer, Peter
Publicado 2008

Methodology capture: discriminating between the "best" and the rest of community practice

por Eales, James M, Pinney, John W, Stevens, Robert D, Robertson, David L
Publicado 2008

Patterns of HIV-1 Protein Interaction Identify Perturbed Host-Cellular Subsystems

por MacPherson, Jamie I., Dickerson, Jonathan E., Pinney, John W., Robertson, David L.
Publicado 2010

metaSHARK: software for automated metabolic network prediction from DNA sequence and its application to the genomes of Plasmodium falciparum and Eimeria tenella

por Pinney, John W., Shirley, Martin W., McConkey, Glenn A., Westhead, David R.
Publicado 2005

All duplicates are not equal: the difference between small-scale and genome duplication

por Hakes, Luke, Pinney, John W, Lovell, Simon C, Oliver, Stephen G, Robertson, David L
Publicado 2007

Intrahost speciations and host switches played an important role in the evolution of herpesviruses

por Brito, Anderson F, Baele, Guy, Nahata, Kanika D, Grubaugh, Nathan D, Pinney, John W
Publicado 2021

An exploration of alternative visualisations of the basic helix-loop-helix protein interaction network

por Holden, Brian J, Pinney, John W, Lovell, Simon C, Amoutzias, Grigoris D, Robertson, David L
Publicado 2007

Bioinformatic analysis of the neprilysin (M13) family of peptidases reveals complex evolutionary and functional relationships

por Bland, Nicholas D, Pinney, John W, Thomas, Josie E, Turner, Anthony J, Isaac, R Elwyn
Publicado 2008

A Unique Dual Activity Amino Acid Hydroxylase in Toxoplasma gondii

por Gaskell, Elizabeth A., Smith, Judith E., Pinney, John W., Westhead, Dave R., McConkey, Glenn A.
Publicado 2009