The Fate of Arabidopsis thaliana Homeologous CNSs and Their Motifs in the Paleohexaploid Brassica rapa

por Subramaniam, Sabarinath, Wang, Xiaowu, Freeling, Michael, Pires, J. Chris
Publicado 2013

Genomic Origin and Diversification of the Glucosinolate MAM Locus

por Abrahams, R. Shawn, Pires, J. Chris, Schranz, M. Eric
Publicado 2020

Escape from Preferential Retention Following Repeated Whole Genome Duplications in Plants

por Schnable, James C., Wang, Xiaowu, Pires, J. Chris, Freeling, Michael
Publicado 2012

Positionally-conserved but sequence-diverged: identification of long non-coding RNAs in the Brassicaceae and Cleomaceae

por Mohammadin, Setareh, Edger, Patrick P., Pires, J. Chris, Schranz, Michael Eric
Publicado 2015

The Molecular Basis of Kale Domestication: Transcriptional Profiling of Developing Leaves Provides New Insights Into the Evolution of a Brassica oleracea Vegetative Morphotype

por Arias, Tatiana, Niederhuth, Chad E., McSteen, Paula, Pires, J. Chris
Publicado 2021

Dosage-sensitivity shapes how genes transcriptionally respond to allopolyploidy and homoeologous exchange in resynthesized Brassica napus

por Bird, Kevin A, Pires, J Chris, VanBuren, Robert, Xiong, Zhiyong, Edger, Patrick P
Publicado 2023

Selection for Higher Gene Copy Number after Different Types of Plant Gene Duplications

por Hudson, Corey M., Puckett, Emily E., Bekaert, Michaël, Pires, J. Chris, Conant, Gavin C.
Publicado 2011

Molecular Resources from Transcriptomes in the Brassicaceae Family

por Lopez, Lua, Wolf, Eva M., Pires, J. Chris, Edger, Patrick P., Koch, Marcus A.
Publicado 2017

Biodiversity comparison among phylogenetic diversity metrics and between three North American prairies(1)

por Kellar, P. Roxanne (Steele), Ahrendsen, Dakota L., Aust, Shelly K., Jones, Amanda R., Pires, J. Chris
Publicado 2015

Chromosome inheritance and meiotic stability in allopolyploid Brassica napus

por Xiong, Zhiyong, Gaeta, Robert T, Edger, Patrick P, Cao, Yao, Zhao, Kanglu, Zhang, Siqi, Pires, J Chris
Publicado 2020

Comparative Phylogenomics Uncovers the Impact of Symbiotic Associations on Host Genome Evolution

por Delaux, Pierre-Marc, Varala, Kranthi, Edger, Patrick P., Coruzzi, Gloria M., Pires, J. Chris, Ané, Jean-Michel
Publicado 2014

Population Structure and Phylogenetic Relationships in a Diverse Panel of Brassica rapa L.

por Bird, Kevin A., An, Hong, Gazave, Elodie, Gore, Michael A., Pires, J. Chris, Robertson, Larry D., Labate, Joanne A.
Publicado 2017

Patterns of Population Variation in Two Paleopolyploid Eudicot Lineages Suggest That Dosage-Based Selection on Homeologs Is Long-Lived

por Hao, Yue, Washburn, Jacob D, Rosenthal, Jacob, Nielsen, Brandon, Lyons, Eric, Edger, Patrick P, Pires, J Chris, Conant, Gavin C
Publicado 2018

Convergent evolution of polyploid genomes from across the eukaryotic tree of life

por Hao, Yue, Fleming, Jonathon, Petterson, Joanna, Lyons, Eric, Edger, Patrick P, Pires, J Chris, Thorne, Jeffrey L, Conant, Gavin C
Publicado 2022

Secondary Structure Analyses of the Nuclear rRNA Internal Transcribed Spacers and Assessment of Its Phylogenetic Utility across the Brassicaceae (Mustards)

por Edger, Patrick P., Tang, Michelle, Bird, Kevin A., Mayfield, Dustin R., Conant, Gavin, Mummenhoff, Klaus, Koch, Marcus A., Pires, J. Chris
Publicado 2014

Retrotransposon Proliferation Coincident with the Evolution of Dioecy in Asparagus

por Harkess, Alex, Mercati, Francesco, Abbate, Loredana, McKain, Michael, Pires, J. Chris, Sala, Tea, Sunseri, Francesco, Falavigna, Agostino, Leebens-Mack, Jim
Publicado 2016

Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus

por Bird, Kevin A., Niederhuth, Chad E., Ou, Shujun, Gehan, Malia, Pires, J. Chris, Xiong, Zhiyong, VanBuren, Robert, Edger, Patrick P.
Publicado 2021

Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses

por Washburn, Jacob D., Schnable, James C., Conant, Gavin C., Brutnell, Thomas P., Shao, Ying, Zhang, Yang, Ludwig, Martha, Davidse, Gerrit, Pires, J. Chris
Publicado 2017

Author Correction: Genome-Guided Phylo-Transcriptomic Methods and the Nuclear Phylogenetic Tree of the Paniceae Grasses

por Washburn, Jacob D., Schnable, James C., Conant, Gavin C., Brutnell, Thomas P., Shao, Ying, Zhang, Yang, Ludwig, Martha, Davidse, Gerrit, Pires, J. Chris
Publicado 2018

Brassica rapa Domestication: Untangling Wild and Feral Forms and Convergence of Crop Morphotypes

por McAlvay, Alex C, Ragsdale, Aaron P, Mabry, Makenzie E, Qi, Xinshuai, Bird, Kevin A, Velasco, Pablo, An, Hong, Pires, J Chris, Emshwiller, Eve
Publicado 2021