Contamination detection and microbiome exploration with GRIMER

por Piro, Vitor C, Renard, Bernhard Y
Publicado 2023

MetaMeta: integrating metagenome analysis tools to improve taxonomic profiling

por Piro, Vitor C., Matschkowski, Marcel, Renard, Bernhard Y.
Publicado 2017

SuRankCo: supervised ranking of contigs in de novo assemblies

por Kuhring, Mathias, Dabrowski, Piotr Wojtek, Piro, Vitor C., Nitsche, Andreas, Renard, Bernhard Y.
Publicado 2015

ganon: precise metagenomics classification against large and up-to-date sets of reference sequences

por Piro, Vitor C, Dadi, Temesgen H, Seiler, Enrico, Reinert, Knut, Renard, Bernhard Y
Publicado 2020

FGAP: an automated gap closing tool

por Piro, Vitor C, Faoro, Helisson, Weiss, Vinicius A, Steffens, Maria BR, Pedrosa, Fabio O, Souza, Emanuel M, Raittz, Roberto T
Publicado 2014

gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms

por Muñoz-Benavent, Maria, Hartkopf, Felix, Van Den Bossche, Tim, Piro, Vitor C, García-Ferris, Carlos, Latorre, Amparo, Renard, Bernhard Y, Muth, Thilo
Publicado 2020

gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms

por Muñoz-Benavent, Maria, Hartkopf, Felix, Van Den Bossche, Tim, Piro, Vitor C, García-Ferris, Carlos, Latorre, Amparo, Renard, Bernhard Y, Muth, Thilo
Publicado 2020

Draft Genome Sequence of Herbaspirillum huttiense subsp. putei IAM 15032, a Strain Isolated from Well Water

por de Souza, Vanely, Piro, Vitor C., Faoro, Helisson, Tadra-Sfeir, Michelle Z., Chicora, Vanessa K., Guizelini, Dieval, Weiss, Vinicius, Vialle, Ricardo A., Monteiro, Rose A., Steffens, Maria Berenice R., Marchaukoski, Jeroniza N., Pedrosa, Fabio O., Cruz, Leonardo M., Chubatsu, Leda S., Raittz, Roberto T.
Publicado 2013

Critical Assessment of Metagenome Interpretation: the second round of challenges

por Meyer, Fernando, Fritz, Adrian, Deng, Zhi-Luo, Koslicki, David, Lesker, Till Robin, Gurevich, Alexey, Robertson, Gary, Alser, Mohammed, Antipov, Dmitry, Beghini, Francesco, Bertrand, Denis, Brito, Jaqueline J., Brown, C. Titus, Buchmann, Jan, Buluç, Aydin, Chen, Bo, Chikhi, Rayan, Clausen, Philip T. L. C., Cristian, Alexandru, Dabrowski, Piotr Wojciech, Darling, Aaron E., Egan, Rob, Eskin, Eleazar, Georganas, Evangelos, Goltsman, Eugene, Gray, Melissa A., Hansen, Lars Hestbjerg, Hofmeyr, Steven, Huang, Pingqin, Irber, Luiz, Jia, Huijue, Jørgensen, Tue Sparholt, Kieser, Silas D., Klemetsen, Terje, Kola, Axel, Kolmogorov, Mikhail, Korobeynikov, Anton, Kwan, Jason, LaPierre, Nathan, Lemaitre, Claire, Li, Chenhao, Limasset, Antoine, Malcher-Miranda, Fabio, Mangul, Serghei, Marcelino, Vanessa R., Marchet, Camille, Marijon, Pierre, Meleshko, Dmitry, Mende, Daniel R., Milanese, Alessio, Nagarajan, Niranjan, Nissen, Jakob, Nurk, Sergey, Oliker, Leonid, Paoli, Lucas, Peterlongo, Pierre, Piro, Vitor C., Porter, Jacob S., Rasmussen, Simon, Rees, Evan R., Reinert, Knut, Renard, Bernhard, Robertsen, Espen Mikal, Rosen, Gail L., Ruscheweyh, Hans-Joachim, Sarwal, Varuni, Segata, Nicola, Seiler, Enrico, Shi, Lizhen, Sun, Fengzhu, Sunagawa, Shinichi, Sørensen, Søren Johannes, Thomas, Ashleigh, Tong, Chengxuan, Trajkovski, Mirko, Tremblay, Julien, Uritskiy, Gherman, Vicedomini, Riccardo, Wang, Zhengyang, Wang, Ziye, Wang, Zhong, Warren, Andrew, Willassen, Nils Peder, Yelick, Katherine, You, Ronghui, Zeller, Georg, Zhao, Zhengqiao, Zhu, Shanfeng, Zhu, Jie, Garrido-Oter, Ruben, Gastmeier, Petra, Hacquard, Stephane, Häußler, Susanne, Khaledi, Ariane, Maechler, Friederike, Mesny, Fantin, Radutoiu, Simona, Schulze-Lefert, Paul, Smit, Nathiana, Strowig, Till, Bremges, Andreas, Sczyrba, Alexander, McHardy, Alice Carolyn
Publicado 2022