Co-occurrence of anaerobic bacteria in colorectal carcinomas

por Warren, René L, Freeman, Douglas J, Pleasance, Stephen, Watson, Peter, Moore, Richard A, Cochrane, Kyla, Allen-Vercoe, Emma, Holt, Robert A
Publicado 2013

Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics’ GemCode Sequencing Data

por Coombe, Lauren, Warren, René L., Jackman, Shaun D., Yang, Chen, Vandervalk, Benjamin P., Moore, Richard A., Pleasance, Stephen, Coope, Robin J., Bohlmann, Joerg, Holt, Robert A., Jones, Steven J. M., Birol, Inanc
Publicado 2016

Extraction-free clinical detection of SARS-CoV-2 virus from saline gargle samples using Hamilton STARlet liquid handler

por Gadkar, Vijay J., Goldfarb, David M., Al-Rawahi, Ghada N., Srigley, Jocelyn A., Smailus, Duane E., Coope, Robin J. N., Pleasance, Stephen, Watson, Nicole, Chen, Tammy, Lam, Sunny, Hoang, Linda, Tilley, Peter A. G.
Publicado 2023

Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure

por Jackman, Shaun D, Coombe, Lauren, Warren, René L, Kirk, Heather, Trinh, Eva, MacLeod, Tina, Pleasance, Stephen, Pandoh, Pawan, Zhao, Yongjun, Coope, Robin J, Bousquet, Jean, Bohlmann, Joerg, Jones, Steven J M, Birol, Inanc
Publicado 2020

Comprehensive Identification of Salmonella enterica Serovar Typhimurium Genes Required for Infection of BALB/c Mice

por Chaudhuri, Roy R., Peters, Sarah E., Pleasance, Stephen J., Northen, Helen, Willers, Chrissie, Paterson, Gavin K., Cone, Danielle B., Allen, Andrew G., Owen, Paul J., Shalom, Gil, Stekel, Dov J., Charles, Ian G., Maskell, Duncan J.
Publicado 2009

Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH)

por Chaudhuri, Roy R, Allen, Andrew G, Owen, Paul J, Shalom, Gil, Stone, Karl, Harrison, Marcus, Burgis, Timothy A, Lockyer, Michael, Garcia-Lara, Jorge, Foster, Simon J, Pleasance, Stephen J, Peters, Sarah E, Maskell, Duncan J, Charles, Ian G
Publicado 2009

Organellar Genomes of White Spruce (Picea glauca): Assembly and Annotation

por Jackman, Shaun D., Warren, René L., Gibb, Ewan A., Vandervalk, Benjamin P., Mohamadi, Hamid, Chu, Justin, Raymond, Anthony, Pleasance, Stephen, Coope, Robin, Wildung, Mark R., Ritland, Carol E., Bousquet, Jean, Jones, Steven J. M., Bohlmann, Joerg, Birol, Inanç
Publicado 2015

Complete Genome Sequence of Mycobacterium chimaera SJ42, a Nonoutbreak Strain from an Immunocompromised Patient with Pulmonary Disease

por Hasan, Nabeeh A., Warren, René L., Epperson, L. Elaine, Malecha, Allyson, Alexander, David C., Turenne, Christine Y., MacMillan, Daniel, Birol, Inanc, Pleasance, Stephen, Coope, Robin, Jones, Steven J. M., Romney, Marc G., Ng, Monica, Chan, Tracy, Rodrigues, Mabel, Tang, Patrick, Gardy, Jennifer L., Strong, Michael
Publicado 2017

The North American bullfrog draft genome provides insight into hormonal regulation of long noncoding RNA

por Hammond, S. Austin, Warren, René L., Vandervalk, Benjamin P., Kucuk, Erdi, Khan, Hamza, Gibb, Ewan A., Pandoh, Pawan, Kirk, Heather, Zhao, Yongjun, Jones, Martin, Mungall, Andrew J., Coope, Robin, Pleasance, Stephen, Moore, Richard A., Holt, Robert A., Round, Jessica M., Ohora, Sara, Walle, Branden V., Veldhoen, Nik, Helbing, Caren C., Birol, Inanc
Publicado 2017

Comprehensive Assignment of Roles for Salmonella Typhimurium Genes in Intestinal Colonization of Food-Producing Animals

por Chaudhuri, Roy R., Morgan, Eirwen, Peters, Sarah E., Pleasance, Stephen J., Hudson, Debra L., Davies, Holly M., Wang, Jinhong, van Diemen, Pauline M., Buckley, Anthony M., Bowen, Alison J., Pullinger, Gillian D., Turner, Daniel J., Langridge, Gemma C., Turner, A. Keith, Parkhill, Julian, Charles, Ian G., Maskell, Duncan J., Stevens, Mark P.
Publicado 2013

Assembling the 20 Gb white spruce (Picea glauca) genome from whole-genome shotgun sequencing data

por Birol, Inanc, Raymond, Anthony, Jackman, Shaun D., Pleasance, Stephen, Coope, Robin, Taylor, Greg A., Yuen, Macaire Man Saint, Keeling, Christopher I., Brand, Dana, Vandervalk, Benjamin P., Kirk, Heather, Pandoh, Pawan, Moore, Richard A., Zhao, Yongjun, Mungall, Andrew J., Jaquish, Barry, Yanchuk, Alvin, Ritland, Carol, Boyle, Brian, Bousquet, Jean, Ritland, Kermit, MacKay, John, Bohlmann, Jörg, Jones, Steven J.M.
Publicado 2013

A Scalable Strand-Specific Protocol Enabling Full-Length Total RNA Sequencing From Single Cells

por Haile, Simon, Corbett, Richard D., LeBlanc, Veronique G., Wei, Lisa, Pleasance, Stephen, Bilobram, Steve, Nip, Ka Ming, Brown, Kirstin, Trinh, Eva, Smith, Jillian, Trinh, Diane L., Bala, Miruna, Chuah, Eric, Coope, Robin J. N., Moore, Richard A., Mungall, Andrew J., Mungall, Karen L., Zhao, Yongjun, Hirst, Martin, Aparicio, Samuel, Birol, Inanc, Jones, Steven J. M., Marra, Marco A.
Publicado 2021

Optimization of magnetic bead-based nucleic acid extraction for SARS-CoV-2 testing using readily available reagents

por Haile, Simon, Nikiforuk, Aidan M., Pandoh, Pawan K., Twa, David D.W., Smailus, Duane E., Nguyen, Jason, Pleasance, Stephen, Wong, Angus, Zhao, Yongjun, Eisler, Diane, Moksa, Michelle, Cao, Qi, Wong, Marcus, Su, Edmund, Krzywinski, Martin, Nelson, Jessica, Mungall, Andrew J., Tsang, Frankie, Prentice, Leah M., Jassem, Agatha, Manges, Amee R., Jones, Steven J.M., Coope, Robin J., Prystajecky, Natalie, Marra, Marco A., Krajden, Mel, Hirst, Martin
Publicado 2022

Improved structural variant interpretation for hereditary cancer susceptibility using long-read sequencing

por Thibodeau, My Linh, O’Neill, Kieran, Dixon, Katherine, Reisle, Caralyn, Mungall, Karen L., Krzywinski, Martin, Shen, Yaoqing, Lim, Howard J., Cheng, Dean, Tse, Kane, Wong, Tina, Chuah, Eric, Fok, Alexandra, Sun, Sophie, Renouf, Daniel, Schaeffer, David F., Cremin, Carol, Chia, Stephen, Young, Sean, Pandoh, Pawan, Pleasance, Stephen, Pleasance, Erin, Mungall, Andrew J., Moore, Richard, Yip, Stephen, Karsan, Aly, Laskin, Janessa, Marra, Marco A., Schrader, Kasmintan A., Jones, Steven J. M.
Publicado 2020

Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing

por Laks, Emma, McPherson, Andrew, Zahn, Hans, Lai, Daniel, Steif, Adi, Brimhall, Jazmine, Biele, Justina, Wang, Beixi, Masud, Tehmina, Ting, Jerome, Grewal, Diljot, Nielsen, Cydney, Leung, Samantha, Bojilova, Viktoria, Smith, Maia, Golovko, Oleg, Poon, Steven, Eirew, Peter, Kabeer, Farhia, Ruiz de Algara, Teresa, Lee, So Ra, Taghiyar, M. Jafar, Huebner, Curtis, Ngo, Jessica, Chan, Tim, Vatrt-Watts, Spencer, Walters, Pascale, Abrar, Nafis, Chan, Sophia, Wiens, Matt, Martin, Lauren, Scott, R. Wilder, Underhill, T. Michael, Chavez, Elizabeth, Steidl, Christian, Da Costa, Daniel, Ma, Yussanne, Coope, Robin J.N., Corbett, Richard, Pleasance, Stephen, Moore, Richard, Mungall, Andrew J., Mar, Colin, Cafferty, Fergus, Gelmon, Karen, Chia, Stephen, Marra, Marco A., Hansen, Carl, Shah, Sohrab P., Aparicio, Samuel
Publicado 2019