An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic

por Kumar, Sudhir, Tao, Qiqing, Weaver, Steven, Sanderford, Maxwell, Caraballo-Ortiz, Marcos A., Sharma, Sudip, Pond, Sergei L. K., Miura, Sayaka
Publicado 2021

An Evolutionary Portrait of the Progenitor SARS-CoV-2 and Its Dominant Offshoots in COVID-19 Pandemic

por Kumar, Sudhir, Tao, Qiqing, Weaver, Steven, Sanderford, Maxwell, Caraballo-Ortiz, Marcos A, Sharma, Sudip, Pond, Sergei L K, Miura, Sayaka
Publicado 2021

TopHap: Rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity

por Caraballo-Ortiz, Marcos A., Miura, Sayaka, Sanderford, Maxwell, Dolker, Tenzin, Tao, Qiqing, Weaver, Steven, Pond, Sergei L. K., Kumar, Sudhir
Publicado 2021

TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity

por Caraballo-Ortiz, Marcos A, Miura, Sayaka, Sanderford, Maxwell, Dolker, Tenzin, Tao, Qiqing, Weaver, Steven, Pond, Sergei L K, Kumar, Sudhir
Publicado 2022

Genomics and epidemiology of a novel SARS-CoV-2 lineage in Manaus, Brazil

por Faria, Nuno R., Mellan, Thomas A., Whittaker, Charles, Claro, Ingra M., Candido, Darlan da S., Mishra, Swapnil, Crispim, Myuki A. E., Sales, Flavia C., Hawryluk, Iwona, McCrone, John T., Hulswit, Ruben J. G., Franco, Lucas A. M., Ramundo, Mariana S., de Jesus, Jaqueline G., Andrade, Pamela S., Coletti, Thais M., Ferreira, Giulia M., Silva, Camila A. M., Manuli, Erika R., Pereira, Rafael H. M., Peixoto, Pedro S., Kraemer, Moritz U., Gaburo, Nelson, Camilo, Cecilia da C., Hoeltgebaum, Henrique, Souza, William M., Rocha, Esmenia C., de Souza, Leandro M., de Pinho, Mariana C., Araujo, Leonardo J. T, Malta, Frederico S. V., de Lima, Aline B., Silva, Joice do P., Zauli, Danielle A. G., de S. Ferreira, Alessandro C., Schnekenberg, Ricardo P, Laydon, Daniel J., Walker, Patrick G. T., Schlüter, Hannah M., dos Santos, Ana L. P., Vidal, Maria S., Del Caro, Valentina S., Filho, Rosinaldo M. F., dos Santos, Helem M., Aguiar, Renato S., Modena, José L. P., Nelson, Bruce, Hay, James A., Monod, Melodie, Miscouridou, Xenia, Coupland, Helen, Sonabend, Raphael, Vollmer, Michaela, Gandy, Axel, Suchard, Marc A., Bowden, Thomas A., Pond, Sergei L. K., Wu, Chieh-Hsi, Ratmann, Oliver, Ferguson, Neil M., Dye, Christopher, Loman, Nick J., Lemey, Philippe, Rambaut, Andrew, Fraiji, Nelson A., Carvalho, Maria do P. S. S., Pybus, Oliver G., Flaxman, Seth, Bhatt, Samir, Sabino, Ester C.
Publicado 2021

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

por Faria, Nuno R., Mellan, Thomas A., Whittaker, Charles, Claro, Ingra M., Candido, Darlan da S., Mishra, Swapnil, Crispim, Myuki A. E., Sales, Flavia C. S., Hawryluk, Iwona, McCrone, John T., Hulswit, Ruben J. G., Franco, Lucas A. M., Ramundo, Mariana S., de Jesus, Jaqueline G., Andrade, Pamela S., Coletti, Thais M., Ferreira, Giulia M., Silva, Camila A. M., Manuli, Erika R., Pereira, Rafael H. M., Peixoto, Pedro S., Kraemer, Moritz U. G., Gaburo, Nelson, Camilo, Cecilia da C., Hoeltgebaum, Henrique, Souza, William M., Rocha, Esmenia C., de Souza, Leandro M., de Pinho, Mariana C., Araujo, Leonardo J. T., Malta, Frederico S. V., de Lima, Aline B., Silva, Joice do P., Zauli, Danielle A. G., Ferreira, Alessandro C. de S., Schnekenberg, Ricardo P., Laydon, Daniel J., Walker, Patrick G. T., Schlter, Hannah M., dos Santos, Ana L. P., Vidal, Maria S., Del Caro, Valentina S., Filho, Rosinaldo M. F., dos Santos, Helem M., Aguiar, Renato S., Proena-Modena, Jos L., Nelson, Bruce, Hay, James A., Monod, Mlodie, Miscouridou, Xenia, Coupland, Helen, Sonabend, Raphael, Vollmer, Michaela, Gandy, Axel, Prete, Carlos A., Nascimento, Vitor H., Suchard, Marc A., Bowden, Thomas A., Pond, Sergei L. K., Wu, Chieh-Hsi, Ratmann, Oliver, Ferguson, Neil M., Dye, Christopher, Loman, Nick J., Lemey, Philippe, Rambaut, Andrew, Fraiji, Nelson A., Carvalho, Maria do P. S. S., Pybus, Oliver G., Flaxman, Seth, Bhatt, Samir, Sabino, Ester C.
Publicado 2021