Conserved 3′ UTR stem-loop structure in L1 and Alu transposons in human genome: possible role in retrotransposition

por Grechishnikova, Daria, Poptsova, Maria
Publicado 2016

Tissue-specific impact of stem-loops and quadruplexes on cancer breakpoints formation

por Cheloshkina, Kseniia, Poptsova, Maria
Publicado 2019

Comprehensive analysis of cancer breakpoints reveals signatures of genetic and epigenetic contribution to cancer genome rearrangements

por Cheloshkina, Kseniia, Poptsova, Maria
Publicado 2021

Z-RNA and the Flipside of the SARS Nsp13 Helicase: Is There a Role for Flipons in Coronavirus-Induced Pathology?

por Herbert, Alan, Poptsova, Maria
Publicado 2022

The power of phylogenetic approaches to detect horizontally transferred genes

por Poptsova, Maria S, Gogarten, J Peter
Publicado 2007

BranchClust: a phylogenetic algorithm for selecting gene families

por Poptsova, Maria S, Gogarten, J Peter
Publicado 2007

Recognition of 3′-end L1, Alu, processed pseudogenes, and mRNA stem-loops in the human genome using sequence-based and structure-based machine-learning models

por Shein, Alexander, Zaikin, Anton, Poptsova, Maria
Publicado 2019

Deep learning approach for predicting functional Z-DNA regions using omics data

por Beknazarov, Nazar, Jin, Seungmin, Poptsova, Maria
Publicado 2020

Mono a Mano: ZBP1’s Love–Hate Relationship with the Kissing Virus

por Herbert, Alan, Fedorov, Aleksandr, Poptsova, Maria
Publicado 2022

Conserved microRNAs and Flipons Shape Gene Expression during Development by Altering Promoter Conformations

por Herbert, Alan, Pavlov, Fedor, Konovalov, Dmitrii, Poptsova, Maria
Publicado 2023

Unsupervised domain adaptation methods for cross-species transfer of regulatory code signals

por Latyshev, Pavel, Pavlov, Fedor, Herbert, Alan, Poptsova, Maria
Publicado 2023

Impact of constitutional copy number variants on biological pathway evolution

por Poptsova, Maria, Banerjee, Samprit, Gokcumen, Omer, Rubin, Mark A, Demichelis, Francesca
Publicado 2013

A Computational Framework Discovers New Copy Number Variants with Functional Importance

por Banerjee, Samprit, Oldridge, Derek, Poptsova, Maria, Hussain, Wasay M., Chakravarty, Dimple, Demichelis, Francesca
Publicado 2011

Special Issue: A, B and Z: The Structure, Function and Genetics of Z-DNA and Z-RNA

por Herbert, Alan, Karapetyan, Sergey, Poptsova, Maria, Vasquez, Karen M., Vicens, Quentin, Vögeli, Beat
Publicado 2021

Quartet decomposition server: a platform for analyzing phylogenetic trees

por Mao, Fenglou, Williams, David, Zhaxybayeva, Olga, Poptsova, Maria, Lapierre, Pascal, Gogarten, J Peter, Xu, Ying
Publicado 2012

Z-flipon variants reveal the many roles of Z-DNA and Z-RNA in health and disease

por Umerenkov, Dmitry, Herbert, Alan, Konovalov, Dmitrii, Danilova, Anna, Beknazarov, Nazar, Kokh, Vladimir, Fedorov, Aleksandr, Poptsova, Maria
Publicado 2023

Hidden Chromosome Symmetry: In Silico Transformation Reveals Symmetry in 2D DNA Walk Trajectories of 671 Chromosomes

por Poptsova, Maria S., Larionov, Sergei A., Ryadchenko, Eugeny V., Rybalko, Sergei D., Zakharov, Ilya A., Loskutov, Alexander
Publicado 2009

Structural features of DNA that determine RNA polymerase II core promoter

por Il’icheva, Irina A., Khodikov, Mingian V., Poptsova, Maria S., Nechipurenko, Dmitry Yu., Nechipurenko, Yury D., Grokhovsky, Sergei L.
Publicado 2016

Non-random DNA fragmentation in next-generation sequencing

por Poptsova, Maria S., Il'icheva, Irina A., Nechipurenko, Dmitry Yu., Panchenko, Larisa A., Khodikov, Mingian V., Oparina, Nina Y., Polozov, Robert V., Nechipurenko, Yury D., Grokhovsky, Sergei L.
Publicado 2014