Sparcle: assigning transcripts to cells in multiplexed images

por Prabhakaran, Sandhya
Publicado 2022

Developing tools for analyzing and viewing multiplexed images

por Prabhakaran, Sandhya, Gatenbee, Chandler, Anderson, Alexander R.A.
Publicado 2022

PhysiCOOL: A generalized framework for model Calibration and Optimization Of modeLing projects

por Gonçalves, Inês G., Hormuth, David A., Prabhakaran, Sandhya, Phillips, Caleb M., García-Aznar, José Manuel
Publicado 2023

Mistic: An open-source multiplexed image t-SNE viewer

por Prabhakaran, Sandhya, Gatenbee, Chandler, Robertson-Tessi, Mark, West, Jeffrey, Beg, Amer A., Gray, Jhanelle, Antonia, Scott, Gatenby, Robert A., Anderson, Alexander R.A.
Publicado 2022

Virtual alignment of pathology image series for multi-gigapixel whole slide images

por Gatenbee, Chandler D., Baker, Ann-Marie, Prabhakaran, Sandhya, Swinyard, Ottilie, Slebos, Robbert J. C., Mandal, Gunjan, Mulholland, Eoghan, Andor, Noemi, Marusyk, Andriy, Leedham, Simon, Conejo-Garcia, Jose R., Chung, Christine H., Robertson-Tessi, Mark, Graham, Trevor A., Anderson, Alexander R. A.
Publicado 2023

Addressing persistent challenges in digital image analysis of cancerous tissues

por Prabhakaran, Sandhya, Yapp, Clarence, Baker, Gregory J., Beyer, Johanna, Chang, Young Hwan, Creason, Allison L., Krueger, Robert, Muhlich, Jeremy, Patterson, Nathan Heath, Sidak, Kevin, Sudar, Damir, Taylor, Adam J., Ternes, Luke, Troidl, Jakob, Xie, Yubin, Sokolov, Artem, Tyson, Darren R.
Publicado 2023

Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations

por Giallonardo, Francesca Di, Töpfer, Armin, Rey, Melanie, Prabhakaran, Sandhya, Duport, Yannick, Leemann, Christine, Schmutz, Stefan, Campbell, Nottania K., Joos, Beda, Lecca, Maria Rita, Patrignani, Andrea, Däumer, Martin, Beisel, Christian, Rusert, Peter, Trkola, Alexandra, Günthard, Huldrych F., Roth, Volker, Beerenwinkel, Niko, Metzner, Karin J.
Publicado 2014

Interactions between ploidy and resource availability shape clonal interference at initiation and recurrence of glioblastoma

por Nowicka, Zuzanna, Rentzeperis, Frederika, Beck, Richard, Tagal, Vural, Pinto, Ana Forero, Scanu, Elisa, Veith, Thomas, Cole, Jackson, Ilter, Didem, Viqueira, William Dominguez, Teer, Jamie K., Maksin, Konstantin, Pasetto, Stefano, Abdalah, Mahmoud A., Fiandaca, Giada, Prabhakaran, Sandhya, Schultz, Andrew, Ojwang, Maureiq, Barnholtz-Sloan, Jill S., Farinhas, Joaquim M., Gomes, Ana P., Katira, Parag, Andor, Noemi
Publicado 2023