Circular Permutation in Proteins

por Bliven, Spencer, Prlić, Andreas
Publicado 2012

The PLOS Computational Biology Software Section

por Prlić, Andreas, Lapp, Hilmar
Publicado 2012

Ten Simple Rules for the Open Development of Scientific Software

por Prlić, Andreas, Procter, James B.
Publicado 2012

SeqRepo: A system for managing local collections of biological sequences

por Hart, Reece K., Prlić, Andreas
Publicado 2020

Impact of genetic variation on three dimensional structure and function of proteins

por Bhattacharya, Roshni, Rose, Peter W., Burley, Stephen K., Prlić, Andreas
Publicado 2017

SISYPHUS—structural alignments for proteins with non-trivial relationships

por Andreeva, Antonina, Prlić, Andreas, Hubbard, Tim J. P., Murzin, Alexey G.
Publicado 2007

Integrating genomic information with protein sequence and 3D atomic level structure at the RCSB protein data bank

por Prlić, Andreas, Kalro, Tara, Bhattacharya, Roshni, Christie, Cole, Burley, Stephen K., Rose, Peter W.
Publicado 2016

Integrating sequence and structural biology with DAS

por Prlić, Andreas, Down, Thomas A, Kulesha, Eugene, Finn, Robert D, Kähäri, Andreas, Hubbard, Tim JP
Publicado 2007

Towards an efficient compression of 3D coordinates of macromolecular structures

por Valasatava, Yana, Bradley, Anthony R., Rose, Alexander S., Duarte, Jose M., Prlić, Andreas, Rose, Peter W.
Publicado 2017

Analyzing the symmetrical arrangement of structural repeats in proteins with CE-Symm

por Bliven, Spencer E., Lafita, Aleix, Rose, Peter W., Capitani, Guido, Prlić, Andreas, Bourne, Philip E.
Publicado 2019

New tools and expanded data analysis capabilities at the protein structure prediction center

por Kryshtafovych, Andriy, Prlic, Andreas, Dmytriv, Zinoviy, Daniluk, Pawel, Milostan, Maciej, Eyrich, Volker, Hubbard, Tim, Fidelis, Krzysztof
Publicado 2007

Pre-calculated protein structure alignments at the RCSB PDB website

por Prlić, Andreas, Bliven, Spencer, Rose, Peter W., Bluhm, Wolfgang F., Bizon, Chris, Godzik, Adam, Bourne, Philip E.
Publicado 2010

MMTF—An efficient file format for the transmission, visualization, and analysis of macromolecular structures

por Bradley, Anthony R., Rose, Alexander S., Pavelka, Antonín, Valasatava, Yana, Duarte, Jose M., Prlić, Andreas, Rose, Peter W.
Publicado 2017

BioJava-ModFinder: identification of protein modifications in 3D structures from the Protein Data Bank

por Gao, Jianjiong, Prlić, Andreas, Bi, Chunxiao, Bluhm, Wolfgang F, Dimitropoulos, Dimitris, Xu, Dong, Bourne, Philip E, Rose, Peter W
Publicado 2017

Investigation of protein quaternary structure via stoichiometry and symmetry ınformation

por Korkmaz, Selcuk, Duarte, Jose M., Prlić, Andreas, Goksuluk, Dincer, Zararsiz, Gokmen, Saracbasi, Osman, Burley, Stephen K., Rose, Peter W.
Publicado 2018

Integration of open access literature into the RCSB Protein Data Bank using BioLit

por Prlić, Andreas, Martinez, Marco A, Dimitropoulos, Dimitris, Beran, Bojan, Yukich, Benjamin T, Rose, Peter W, Bourne, Philip E, Fink, J Lynn
Publicado 2010

DASMI: exchanging, annotating and assessing molecular interaction data

por Blankenburg, Hagen, Finn, Robert D., Prlić, Andreas, Jenkinson, Andrew M., Ramírez, Fidel, Emig, Dorothea, Schelhorn, Sven-Eric, Büch, Joachim, Lengauer, Thomas, Albrecht, Mario
Publicado 2009

Will Widgets and Semantic Tagging Change Computational Biology?

por Bourne, Philip E., Beran, Bojan, Bi, Chunxiao, Bluhm, Wolfgang, Dunbrack, Roland, Prlić, Andreas, Quinn, Greg, Rose, Peter, Shah, Raship, Tao, Wendy, Weitzner, Brian, Yukich, Ben
Publicado 2010

RCSB PDB Mobile: iOS and Android mobile apps to provide data access and visualization to the RCSB Protein Data Bank

por Quinn, Gregory B., Bi, Chunxiao, Christie, Cole H., Pang, Kyle, Prlić, Andreas, Nakane, Takanori, Zardecki, Christine, Voigt, Maria, Berman, Helen M., Bourne, Philip E., Rose, Peter W.
Publicado 2015

Quality assurance for the query and distribution systems of the RCSB Protein Data Bank

por Bluhm, Wolfgang F., Beran, Bojan, Bi, Chunxiao, Dimitropoulos, Dimitris, Prlić, Andreas, Quinn, Gregory B., Rose, Peter W., Shah, Chaitali, Young, Jasmine, Yukich, Benjamin, Berman, Helen M., Bourne, Philip E.
Publicado 2011