“Genes”

por Prohaska, Sonja J., Stadler, Peter F.
Publicado 2008

SynBlast: Assisting the analysis of conserved synteny information

por Lehmann, Jörg, Stadler, Peter F, Prohaska, Sonja J
Publicado 2008

Evolution and Quantitative Comparison of Genome-Wide Protein Domain Distributions

por Parikesit, Arli A., Stadler, Peter F., Prohaska, Sonja J.
Publicado 2011

Multiple sequence alignment with user-defined anchor points

por Morgenstern, Burkhard, Prohaska, Sonja J, Pöhler, Dirk, Stadler, Peter F
Publicado 2006

Algebraic Dynamic Programming over general data structures

por zu Siederdissen, Christian Höner, Prohaska, Sonja J, Stadler, Peter F
Publicado 2015

The paralog-to-contig assignment problem: high quality gene models from fragmented assemblies

por Indrischek, Henrike, Wieseke, Nicolas, Stadler, Peter F., Prohaska, Sonja J.
Publicado 2016

Divergent Evolution of Eukaryotic CC- and A-Adding Enzymes

por Erber, Lieselotte, Franz, Paul, Betat, Heike, Prohaska, Sonja, Mörl, Mario
Publicado 2020

Evolution of DNA Methylation Across Ecdysozoa

por Engelhardt, Jan, Scheer, Oliver, Stadler, Peter F., Prohaska, Sonja J.
Publicado 2022

Defining genes: a computational framework

por Stadler, Peter F., Prohaska, Sonja J., Forst, Christian V., Krakauer, David C.
Publicado 2009

Proteinortho: Detection of (Co-)orthologs in large-scale analysis

por Lechner, Marcus, Findeiß, Sven, Steiner, Lydia, Marz, Manja, Stadler, Peter F, Prohaska, Sonja J
Publicado 2011

Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes

por Indrischek, Henrike, Prohaska, Sonja J., Gurevich, Vsevolod V., Gurevich, Eugenia V., Stadler, Peter F.
Publicado 2017

A Global Genome Segmentation Method for Exploration of Epigenetic Patterns

por Steiner, Lydia, Hopp, Lydia, Wirth, Henry, Galle, Jörg, Binder, Hans, Prohaska, Sonja J., Rohlf, Thimo
Publicado 2012

The CHR site: definition and genome-wide identification of a cell cycle transcriptional element

por Müller, Gerd A., Wintsche, Axel, Stangner, Konstanze, Prohaska, Sonja J., Stadler, Peter F., Engeland, Kurt
Publicado 2014

The ancestor of modern Holozoa acquired the CCA-adding enzyme from Alphaproteobacteria by horizontal gene transfer

por Betat, Heike, Mede, Tobias, Tretbar, Sandy, Steiner, Lydia, Stadler, Peter F., Mörl, Mario, Prohaska, Sonja J.
Publicado 2015

Noisy: Identification of problematic columns in multiple sequence alignments

por Dress, Andreas WM, Flamm, Christoph, Fritzsch, Guido, Grünewald, Stefan, Kruspe, Matthias, Prohaska, Sonja J, Stadler, Peter F
Publicado 2008

Substrate Affinity Versus Catalytic Efficiency: Ancestral Sequence Reconstruction of tRNA Nucleotidyltransferases Solves an Enzyme Puzzle

por Hager, Martina, Pöhler, Marie-Theres, Reinhardt, Franziska, Wellner, Karolin, Hübner, Jessica, Betat, Heike, Prohaska, Sonja, Mörl, Mario
Publicado 2022

Computational RNomics of Drosophilids

por Rose, Dominic, Hackermüller, Jörg, Washietl, Stefan, Reiche, Kristin, Hertel, Jana, Findeiß, Sven, Stadler, Peter F, Prohaska, Sonja J
Publicado 2007

Genomic organization of eukaryotic tRNAs

por Bermudez-Santana, Clara, Attolini, Camille Stephan-Otto, Kirsten, Toralf, Engelhardt, Jan, Prohaska, Sonja J, Steigele, Stephan, Stadler, Peter F
Publicado 2010

Expansion of gene clusters, circular orders, and the shortest Hamiltonian path problem

por Prohaska, Sonja J., Berkemer, Sarah J., Gärtner, Fabian, Gatter, Thomas, Retzlaff, Nancy, Höner zu Siederdissen, Christian, Stadler, Peter F.
Publicado 2017

Unusual Occurrence of Two Bona-Fide CCA-Adding Enzymes in Dictyostelium discoideum

por Erber, Lieselotte, Hoffmann, Anne, Fallmann, Jörg, Hagedorn, Monica, Hammann, Christian, Stadler, Peter F., Betat, Heike, Prohaska, Sonja, Mörl, Mario
Publicado 2020