Redundans: an assembly pipeline for highly heterozygous genomes

por Pryszcz, Leszek P., Gabaldón, Toni
Publicado 2016

MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score

por Pryszcz, Leszek P., Huerta-Cepas, Jaime, Gabaldón, Toni
Publicado 2011

Unexpected Genomic Variability in Clinical and Environmental Strains of the Pathogenic Yeast Candida parapsilosis

por Pryszcz, Leszek P., Németh, Tibor, Gácser, Attila, Gabaldón, Toni
Publicado 2013

Genome Comparison of Candida orthopsilosis Clinical Strains Reveals the Existence of Hybrids between Two Distinct Subspecies

por Pryszcz, Leszek P., Németh, Tibor, Gácser, Attila, Gabaldón, Toni
Publicado 2014

MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life

por Chorostecki, Uciel, Molina, Manuel, Pryszcz, Leszek P, Gabaldón, Toni
Publicado 2020

Epigenetic Response of Yarrowia lipolytica to Stress: Tracking Methylation Level and Search for Methylation Patterns via Whole-Genome Sequencing

por Kubiak-Szymendera, Monika, Pryszcz, Leszek P., Białas, Wojciech, Celińska, Ewelina
Publicado 2021

Transcriptome analyses of cells carrying the Type II Csp231I restriction–modification system reveal cross-talk between two unrelated transcription factors: C protein and the Rac pr...

por Negri, Alessandro, Jąkalski, Marcin, Szczuka, Aleksandra, Pryszcz, Leszek P, Mruk, Iwona
Publicado 2019

Distinct roles of the polarity factors Boi1 and Boi2 in the control of exocytosis and abscission in budding yeast

por Masgrau, Aina, Battola, Andrea, Sanmartin, Trinidad, Pryszcz, Leszek P., Gabaldón, Toni, Mendoza, Manuel
Publicado 2017

Draft Genome Sequences of the Highly Halotolerant Strain Zygosaccharomyces rouxii ATCC 42981 and the Novel Allodiploid Strain Zygosaccharomyces sapae ATB301(T) Obtained Using the M...

por Bizzarri, Melissa, Cassanelli, Stefano, Pryszcz, Leszek P., Gawor, Jan, Gromadka, Robert, Solieri, Lisa
Publicado 2018

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome

por Huerta-Cepas, Jaime, Capella-Gutiérrez, Salvador, Pryszcz, Leszek P., Marcet-Houben, Marina, Gabaldón, Toni
Publicado 2014

Interplay of Chimeric Mating-Type Loci Impairs Fertility Rescue and Accounts for Intra-Strain Variability in Zygosaccharomyces rouxii Interspecies Hybrid ATCC42981

por Bizzarri, Melissa, Cassanelli, Stefano, Bartolini, Laura, Pryszcz, Leszek P., Dušková, Michala, Sychrová, Hana, Solieri, Lisa
Publicado 2019

Genome analysis of Candida subhashii reveals its hybrid nature and dual mitochondrial genome conformations

por Mixão, Verónica, Hegedűsová, Eva, Saus, Ester, Pryszcz, Leszek P, Cillingová, Andrea, Nosek, Jozef, Gabaldón, Toni
Publicado 2021

nextPARS: parallel probing of RNA structures in Illumina

por Saus, Ester, Willis, Jesse R., Pryszcz, Leszek P., Hafez, Ahmed, Llorens, Carlos, Himmelbauer, Heinz, Gabaldón, Toni
Publicado 2018

Comparative transcriptome analysis reveals new molecular pathways for cucumber genes related to sex determination

por Pawełkowicz, Magdalena, Pryszcz, Leszek, Skarzyńska, Agnieszka, Wóycicki, Rafał K., Posyniak, Kacper, Rymuszka, Jacek, Przybecki, Zbigniew, Pląder, Wojciech
Publicado 2019

Genome analysis of five recently described species of the CUG-Ser clade uncovers Candida theae as a new hybrid lineage with pathogenic potential in the Candida parapsilosis species...

por Mixão, Verónica, del Olmo, Valentina, Hegedűsová, Eva, Saus, Ester, Pryszcz, Leszek, Cillingová, Andrea, Nosek, Jozef, Gabaldón, Toni
Publicado 2022

PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions

por Huerta-Cepas, Jaime, Capella-Gutierrez, Salvador, Pryszcz, Leszek P., Denisov, Ivan, Kormes, Diego, Marcet-Houben, Marina, Gabaldón, Toni
Publicado 2011

MasterOfPores: A Workflow for the Analysis of Oxford Nanopore Direct RNA Sequencing Datasets

por Cozzuto, Luca, Liu, Huanle, Pryszcz, Leszek P., Pulido, Toni Hermoso, Delgado-Tejedor, Anna, Ponomarenko, Julia, Novoa, Eva Maria
Publicado 2020

The Genomic Aftermath of Hybridization in the Opportunistic Pathogen Candida metapsilosis

por Pryszcz, Leszek P., Németh, Tibor, Saus, Ester, Ksiezopolska, Ewa, Hegedűsová, Eva, Nosek, Jozef, Wolfe, Kenneth H., Gacser, Attila, Gabaldón, Toni
Publicado 2015

Correction: The Genomic Aftermath of Hybridization in the Opportunistic Pathogen Candida metapsilosis

por Pryszcz, Leszek P., Németh, Tibor, Saus, Ester, Ksiezopolska, Ewa, Hegedűsová, Eva, Nosek, Jozef, Wolfe, Kenneth H., Gacser, Attila, Gabaldón, Toni
Publicado 2016

Transcriptome Analyses of Mosaic (MSC) Mitochondrial Mutants of Cucumber in a Highly Inbred Nuclear Background

por Mróz, Tomasz L., Eves-van den Akker, Sebastian, Bernat, Agata, Skarzyńska, Agnieszka, Pryszcz, Leszek, Olberg, Madeline, Havey, Michael J., Bartoszewski, Grzegorz
Publicado 2018