Consensus sequences improve PSI-BLAST through mimicking profile–profile alignments

por Przybylski, Dariusz, Rost, Burkhard
Publicado 2007

Powerful fusion: PSI-BLAST and consensus sequences

por Przybylski, Dariusz, Rost, Burkhard
Publicado 2008

A transcriptomic taxonomy of Drosophila circadian neurons around the clock

por Ma, Dingbang, Przybylski, Dariusz, Abruzzi, Katharine C, Schlichting, Matthias, Li, Qunlong, Long, Xi, Rosbash, Michael
Publicado 2021

DNA read count calibration for single-molecule, long-read sequencing

por Soares, Luis M. M., Hanscom, Terrence, Selby, Donald E., Adjei, Samuel, Wang, Wei, Przybylski, Dariusz, Thompson, John F.
Publicado 2022

Cancer immunogenomic approach to neoantigen discovery in a checkpoint blockade responsive murine model of oral cavity squamous cell carcinoma

por Zolkind, Paul, Przybylski, Dariusz, Marjanovic, Nemanja, Nguyen, Lan, Lin, Tianxiang, Johanns, Tanner, Alexandrov, Anton, Zhou, Liye, Allen, Clint T., Miceli, Alexander P., Schreiber, Robert D., Artyomov, Maxim, Dunn, Gavin P., Uppaluri, Ravindra
Publicado 2017

ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads

por MacCallum, Iain, Przybylski, Dariusz, Gnerre, Sante, Burton, Joshua, Shlyakhter, Ilya, Gnirke, Andreas, Malek, Joel, McKernan, Kevin, Ranade, Swati, Shea, Terrance P, Williams, Louise, Young, Sarah, Nusbaum, Chad, Jaffe, David B
Publicado 2009

Finished bacterial genomes from shotgun sequence data

por Ribeiro, Filipe J., Przybylski, Dariusz, Yin, Shuangye, Sharpe, Ted, Gnerre, Sante, Abouelleil, Amr, Berlin, Aaron M., Montmayeur, Anna, Shea, Terrance P., Walker, Bruce J., Young, Sarah K., Russ, Carsten, Nusbaum, Chad, MacCallum, Iain, Jaffe, David B.
Publicado 2012

Lipid availability determines skeletal progenitor cell fate via SOX9

por van Gastel, Nick, Stegen, Steve, Eelen, Guy, Schoors, Sandra, Carlier, Aurélie, Daniëls, Veerle W., Baryawno, Ninib, Przybylski, Dariusz, Depypere, Maarten, Stiers, Pieter-Jan, Lambrechts, Dennis, Van Looveren, Riet, Torrekens, Sophie, Sharda, Azeem, Agostinis, Patrizia, Lambrechts, Diether, Maes, Frederik, Swinnen, Johan V., Geris, Liesbet, Van Oosterwyck, Hans, Thienpont, Bernard, Carmeliet, Peter, Scadden, David T., Carmeliet, Geert
Publicado 2020

The genomic substrate for adaptive radiation in African cichlid fish

por Brawand, David, Wagner, Catherine E., Li, Yang I., Malinsky, Milan, Keller, Irene, Fan, Shaohua, Simakov, Oleg, Ng, Alvin Y., Lim, Zhi Wei, Bezault, Etienne, Turner-Maier, Jason, Johnson, Jeremy, Alcazar, Rosa, Noh, Hyun Ji, Russell, Pamela, Aken, Bronwen, Alföldi, Jessica, Amemiya, Chris, Azzouzi, Naoual, Baroiller, Jean-François, Barloy-Hubler, Frederique, Berlin, Aaron, Bloomquist, Ryan, Carleton, Karen L., Conte, Matthew A., D'Cotta, Helena, Eshel, Orly, Gaffney, Leslie, Galibert, Francis, Gante, Hugo F., Gnerre, Sante, Greuter, Lucie, Guyon, Richard, Haddad, Natalie S., Haerty, Wilfried, Harris, Rayna M., Hofmann, Hans A., Hourlier, Thibaut, Hulata, Gideon, Jaffe, David B., Lara, Marcia, Lee, Alison P., MacCallum, Iain, Mwaiko, Salome, Nikaido, Masato, Nishihara, Hidenori, Ozouf-Costaz, Catherine, Penman, David J., Przybylski, Dariusz, Rakotomanga, Michaelle, Renn, Suzy C. P., Ribeiro, Filipe J., Ron, Micha, Salzburger, Walter, Sanchez-Pulido, Luis, Santos, M. Emilia, Searle, Steve, Sharpe, Ted, Swofford, Ross, Tan, Frederick J., Williams, Louise, Young, Sarah, Yin, Shuangye, Okada, Norihiro, Kocher, Thomas D., Miska, Eric A., Lander, Eric S., Venkatesh, Byrappa, Fernald, Russell D., Meyer, Axel, Ponting, Chris P., Streelman, J. Todd, Lindblad-Toh, Kerstin, Seehausen, Ole, Di Palma, Federica
Publicado 2014

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

por Bradnam, Keith R, Fass, Joseph N, Alexandrov, Anton, Baranay, Paul, Bechner, Michael, Birol, Inanç, Boisvert, Sébastien, Chapman, Jarrod A, Chapuis, Guillaume, Chikhi, Rayan, Chitsaz, Hamidreza, Chou, Wen-Chi, Corbeil, Jacques, Del Fabbro, Cristian, Docking, T Roderick, Durbin, Richard, Earl, Dent, Emrich, Scott, Fedotov, Pavel, Fonseca, Nuno A, Ganapathy, Ganeshkumar, Gibbs, Richard A, Gnerre, Sante, Godzaridis, Élénie, Goldstein, Steve, Haimel, Matthias, Hall, Giles, Haussler, David, Hiatt, Joseph B, Ho, Isaac Y, Howard, Jason, Hunt, Martin, Jackman, Shaun D, Jaffe, David B, Jarvis, Erich D, Jiang, Huaiyang, Kazakov, Sergey, Kersey, Paul J, Kitzman, Jacob O, Knight, James R, Koren, Sergey, Lam, Tak-Wah, Lavenier, Dominique, Laviolette, François, Li, Yingrui, Li, Zhenyu, Liu, Binghang, Liu, Yue, Luo, Ruibang, MacCallum, Iain, MacManes, Matthew D, Maillet, Nicolas, Melnikov, Sergey, Naquin, Delphine, Ning, Zemin, Otto, Thomas D, Paten, Benedict, Paulo, Octávio S, Phillippy, Adam M, Pina-Martins, Francisco, Place, Michael, Przybylski, Dariusz, Qin, Xiang, Qu, Carson, Ribeiro, Filipe J, Richards, Stephen, Rokhsar, Daniel S, Ruby, J Graham, Scalabrin, Simone, Schatz, Michael C, Schwartz, David C, Sergushichev, Alexey, Sharpe, Ted, Shaw, Timothy I, Shendure, Jay, Shi, Yujian, Simpson, Jared T, Song, Henry, Tsarev, Fedor, Vezzi, Francesco, Vicedomini, Riccardo, Vieira, Bruno M, Wang, Jun, Worley, Kim C, Yin, Shuangye, Yiu, Siu-Ming, Yuan, Jianying, Zhang, Guojie, Zhang, Hao, Zhou, Shiguo, Korf, Ian F
Publicado 2013

Analysis of the African coelacanth genome sheds light on tetrapod evolution

por Amemiya, Chris T., Alföldi, Jessica, Lee, Alison P., Fan, Shaohua, Philippe, Hervé, MacCallum, Iain, Braasch, Ingo, Manousaki, Tereza, Schneider, Igor, Rohner, Nicolas, Organ, Chris, Chalopin, Domitille, Smith, Jeramiah J., Robinson, Mark, Dorrington, Rosemary A., Gerdol, Marco, Aken, Bronwen, Biscotti, Maria Assunta, Barucca, Marco, Baurain, Denis, Berlin, Aaron M., Blatch, Gregory L., Buonocore, Francesco, Burmester, Thorsten, Campbell, Michael S., Canapa, Adriana, Cannon, John P., Christoffels, Alan, De Moro, Gianluca, Edkins, Adrienne L., Fan, Lin, Fausto, Anna Maria, Feiner, Nathalie, Forconi, Mariko, Gamieldien, Junaid, Gnerre, Sante, Gnirke, Andreas, Goldstone, Jared V., Haerty, Wilfried, Hahn, Mark E., Hesse, Uljana, Hoffmann, Steve, Johnson, Jeremy, Karchner, Sibel I., Kuraku, Shigehiro, Lara, Marcia, Levin, Joshua Z., Litman, Gary W., Mauceli, Evan, Miyake, Tsutomu, Mueller, M. Gail, Nelson, David R., Nitsche, Anne, Olmo, Ettore, Ota, Tatsuya, Pallavicini, Alberto, Panji, Sumir, Picone, Barbara, Ponting, Chris P., Prohaska, Sonja J., Przybylski, Dariusz, Saha, Nil Ratan, Ravi, Vydianathan, Ribeiro, Filipe J., Sauka-Spengler, Tatjana, Scapigliati, Giuseppe, Searle, Stephen M. J., Sharpe, Ted, Simakov, Oleg, Stadler, Peter F., Stegeman, John J., Sumiyama, Kenta, Tabbaa, Diana, Tafer, Hakim, Turner-Maier, Jason, van Heusden, Peter, White, Simon, Williams, Louise, Yandell, Mark, Brinkmann, Henner, Volff, Jean-Nicolas, Tabin, Clifford J., Shubin, Neil, Schartl, Manfred, Jaffe, David, Postlethwait, John H., Venkatesh, Byrappa, Di Palma, Federica, Lander, Eric S., Meyer, Axel, Lindblad-Toh, Kerstin
Publicado 2013