Functional Genomics, Transcriptomics, and Proteomics Reveal Distinct Combat Strategies Between Lineages of Wood-Degrading Fungi With Redundant Wood Decay Mechanisms

por Presley, Gerald N., Zhang, Jiwei, Purvine, Samuel O., Schilling, Jonathan S.
Publicado 2020

Mechanisms of Manganese(II) Oxidation by Filamentous Ascomycete Fungi Vary With Species and Time as a Function of Secretome Composition

por Zeiner, Carolyn A., Purvine, Samuel O., Zink, Erika, Wu, Si, Paša-Tolić, Ljiljana, Chaput, Dominique L., Santelli, Cara M., Hansel, Colleen M.
Publicado 2021

Optimizing metaproteomics database construction: lessons from a study of the vaginal microbiome

por Lee, Elliot M., Srinivasan, Sujatha, Purvine, Samuel O., Fiedler, Tina L., Leiser, Owen P., Proll, Sean C., Minot, Samuel S., Deatherage Kaiser, Brooke L., Fredricks, David N.
Publicado 2023

Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica

por Pomraning, Kyle R., Kim, Young-Mo, Nicora, Carrie D., Chu, Rosalie K., Bredeweg, Erin L., Purvine, Samuel O., Hu, Dehong, Metz, Thomas O., Baker, Scott E.
Publicado 2016

Blood Peptidome-Degradome Profile of Breast Cancer

por Shen, Yufeng, Tolić, Nikola, Liu, Tao, Zhao, Rui, Petritis, Brianne O., Gritsenko, Marina A., Camp, David G., Moore, Ronald J., Purvine, Samuel O., Esteva, Francisco J., Smith, Richard D.
Publicado 2010

The Specific Carbohydrate Diet and Diet Modification as Induction Therapy for Pediatric Crohn’s Disease: A Randomized Diet Controlled Trial

por Suskind, David L., Lee, Dale, Kim, Young-Mo, Wahbeh, Ghassan, Singh, Namita, Braly, Kimberly, Nuding, Mason, Nicora, Carrie D., Purvine, Samuel O., Lipton, Mary S., Jansson, Janet K., Nelson, William C.
Publicado 2020

Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes

por Dresang, Lindsay R, Teuton, Jeremy R, Feng, Huichen, Jacobs, Jon M, Camp, David G, Purvine, Samuel O, Gritsenko, Marina A, Li, Zhihua, Smith, Richard D, Sugden, Bill, Moore, Patrick S, Chang, Yuan
Publicado 2011

Automated Genome Mining of Ribosomal Peptide Natural Products

por Mohimani, Hosein, Kersten, Roland D., Liu, Wei-Ting, Wang, Mingxun, Purvine, Samuel O., Wu, Si, Brewer, Heather M., Pasa-Tolic, Ljiljana, Bandeira, Nuno, Moore, Bradley S., Pevzner, Pavel A., Dorrestein, Pieter C.
Publicado 2014

The Pacific Northwest National Laboratory library of bacterial and archaeal proteomic biodiversity

por Payne, Samuel H., Monroe, Matthew E., Overall, Christopher C., Kiebel, Gary R., Degan, Michael, Gibbons, Bryson C., Fujimoto, Grant M., Purvine, Samuel O., Adkins, Joshua N., Lipton, Mary S., Smith, Richard D.
Publicado 2015

Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica

por Kerkhoven, Eduard J., Kim, Young-Mo, Wei, Siwei, Nicora, Carrie D., Fillmore, Thomas L., Purvine, Samuel O., Webb-Robertson, Bobbie-Jo, Smith, Richard D., Baker, Scott E., Metz, Thomas O., Nielsen, Jens
Publicado 2017

Multiomics resolution of molecular events during a day in the life of Chlamydomonas

por Strenkert, Daniela, Schmollinger, Stefan, Gallaher, Sean D., Salomé, Patrice A., Purvine, Samuel O., Nicora, Carrie D., Mettler-Altmann, Tabea, Soubeyrand, Eric, Weber, Andreas P. M., Lipton, Mary S., Basset, Gilles J., Merchant, Sabeeha S.
Publicado 2019

Establishing the Proteome of Normal Human Cerebrospinal Fluid

por Schutzer, Steven E., Liu, Tao, Natelson, Benjamin H., Angel, Thomas E., Schepmoes, Athena A., Purvine, Samuel O., Hixson, Kim K., Lipton, Mary S., Camp, David G., Coyle, Patricia K., Smith, Richard D., Bergquist, Jonas
Publicado 2010

Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates

por Wang, Dong, Dasari, Surendra, Chambers, Matthew C., Holman, Jerry D., Chen, Kan, Liebler, Daniel C., Orton, Daniel J., Purvine, Samuel O., Monroe, Matthew E., Chung, Chang Y., Rose, Kristie L., Tabb, David L.
Publicado 2013

Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi

por Zeiner, Carolyn A., Purvine, Samuel O., Zink, Erika M., Paša-Tolić, Ljiljana, Chaput, Dominique L., Haridas, Sajeet, Wu, Si, LaButti, Kurt, Grigoriev, Igor V., Henrissat, Bernard, Santelli, Cara M., Hansel, Colleen M.
Publicado 2016

Phosphoproteomics Profiling of Human Skin Fibroblast Cells Reveals Pathways and Proteins Affected by Low Doses of Ionizing Radiation

por Yang, Feng, Waters, Katrina M., Miller, John H., Gritsenko, Marina A., Zhao, Rui, Du, Xiuxia, Livesay, Eric A., Purvine, Samuel O., Monroe, Matthew E., Wang, Yingchun, Camp, David G., Smith, Richard D., Stenoien, David L.
Publicado 2010

Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management

por Davidi, Lital, Gallaher, Sean D., Ben-David, Eyal, Purvine, Samuel O., Fillmore, Thomas L., Nicora, Carrie D., Craig, Rory J., Schmollinger, Stefan, Roje, Sanja, Blaby-Haas, Crysten E., Auber, Robert P., Wisecaver, Jennifer H., Merchant, Sabeeha S.
Publicado 2023

Deep-Subsurface Pressure Stimulates Metabolic Plasticity in Shale-Colonizing Halanaerobium spp.

por Booker, Anne E., Hoyt, David W., Meulia, Tea, Eder, Elizabeth, Nicora, Carrie D., Purvine, Samuel O., Daly, Rebecca A., Moore, Joseph D., Wunch, Kenneth, Pfiffner, Susan M., Lipton, Mary S., Mouser, Paula J., Wrighton, Kelly C., Wilkins, Michael J.
Publicado 2019

Anaerobic gut fungi are an untapped reservoir of natural products

por Swift, Candice L., Louie, Katherine B., Bowen, Benjamin P., Olson, Heather M., Purvine, Samuel O., Salamov, Asaf, Mondo, Stephen J., Solomon, Kevin V., Wright, Aaron T., Northen, Trent R., Grigoriev, Igor V., Keller, Nancy P., O’Malley, Michelle A.
Publicado 2021

Decrypting bacterial polyphenol metabolism in an anoxic wetland soil

por McGivern, Bridget B., Tfaily, Malak M., Borton, Mikayla A., Kosina, Suzanne M., Daly, Rebecca A., Nicora, Carrie D., Purvine, Samuel O., Wong, Allison R., Lipton, Mary S., Hoyt, David W., Northen, Trent R., Hagerman, Ann E., Wrighton, Kelly C.
Publicado 2021

Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models

por Lewis, Nathan E, Hixson, Kim K, Conrad, Tom M, Lerman, Joshua A, Charusanti, Pep, Polpitiya, Ashoka D, Adkins, Joshua N, Schramm, Gunnar, Purvine, Samuel O, Lopez-Ferrer, Daniel, Weitz, Karl K, Eils, Roland, König, Rainer, Smith, Richard D, Palsson, Bernhard Ø
Publicado 2010