Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets

por Gobet, Angélique, Quince, Christopher, Ramette, Alban
Publicado 2010

Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics

por Holmes, Ian, Harris, Keith, Quince, Christopher
Publicado 2012

Strainberry: automated strain separation in low-complexity metagenomes using long reads

por Vicedomini, Riccardo, Quince, Christopher, Darling, Aaron E., Chikhi, Rayan
Publicado 2021

Removing Noise From Pyrosequenced Amplicons

por Quince, Christopher, Lanzen, Anders, Davenport, Russell J, Turnbaugh, Peter J
Publicado 2011

Bioaugmentation Mitigates the Impact of Estrogen on Coliform-Grazing Protozoa in Slow Sand Filters

por Haig, Sarah-Jane, Gauchotte-Lindsay, Caroline, Collins, Gavin, Quince, Christopher
Publicado 2016

VSEARCH: a versatile open source tool for metagenomics

por Rognes, Torbjørn, Flouri, Tomáš, Nichols, Ben, Quince, Christopher, Mahé, Frédéric
Publicado 2016

Swarm: robust and fast clustering method for amplicon-based studies

por Mahé, Frédéric, Rognes, Torbjørn, Quince, Christopher, de Vargas, Colomban, Dunthorn, Micah
Publicado 2014

Swarm v2: highly-scalable and high-resolution amplicon clustering

por Mahé, Frédéric, Rognes, Torbjørn, Quince, Christopher, de Vargas, Colomban, Dunthorn, Micah
Publicado 2015

A Comparison of rpoB and 16S rRNA as Markers in Pyrosequencing Studies of Bacterial Diversity

por Vos, Michiel, Quince, Christopher, Pijl, Agata S., de Hollander, Mattias, Kowalchuk, George A.
Publicado 2012

PhyloPythiaS+: a self-training method for the rapid reconstruction of low-ranking taxonomic bins from metagenomes

por Gregor, Ivan, Dröge, Johannes, Schirmer, Melanie, Quince, Christopher, McHardy, Alice C.
Publicado 2016

Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data

por Schirmer, Melanie, D’Amore, Rosalinda, Ijaz, Umer Z., Hall, Neil, Quince, Christopher
Publicado 2016

Efficient High-Quality Metagenome Assembly from Long Accurate Reads using Minimizer-space de Bruijn Graphs

por Benoit, Gaëtan, Raguideau, Sébastien, James, Robert, Phillippy, Adam M., Chikhi, Rayan, Quince, Christopher
Publicado 2023

UCHIME improves sensitivity and speed of chimera detection

por Edgar, Robert C., Haas, Brian J., Clemente, Jose C., Quince, Christopher, Knight, Rob
Publicado 2011

Headwaters are critical reservoirs of microbial diversity for fluvial networks

por Besemer, Katharina, Singer, Gabriel, Quince, Christopher, Bertuzzo, Enrico, Sloan, William, Battin, Tom J.
Publicado 2013

The Relationship between Microbial Community Evenness and Function in Slow Sand Filters

por Haig, Sarah-Jane, Quince, Christopher, Davies, Robert L., Dorea, Caetano C., Collins, Gavin
Publicado 2015

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform

por Schirmer, Melanie, Ijaz, Umer Z., D'Amore, Rosalinda, Hall, Neil, Sloan, William T., Quince, Christopher
Publicado 2015

Phylogenetic congruence and ecological coherence in terrestrial Thaumarchaeota

por Oton, Eduard Vico, Quince, Christopher, Nicol, Graeme W, Prosser, James I, Gubry-Rangin, Cécile
Publicado 2016

Size Shapes the Active Microbiome of the Methanogenic Granules, Corroborating a Biofilm Life Cycle

por Trego, Anna Christine, O’Sullivan, Sarah, Quince, Christopher, Mills, Simon, Ijaz, Umer Zeeshan, Collins, Gavin
Publicado 2020

Swarm v3: towards tera-scale amplicon clustering

por Mahé, Frédéric, Czech, Lucas, Stamatakis, Alexandros, Quince, Christopher, de Vargas, Colomban, Dunthorn, Micah, Rognes, Torbjørn
Publicado 2021

Response of Archaeal and Bacterial Soil Communities to Changes Associated with Outdoor Cattle Overwintering

por Chroňáková, Alica, Schloter-Hai, Brigitte, Radl, Viviane, Endesfelder, David, Quince, Christopher, Elhottová, Dana, Šimek, Miloslav, Schloter, Michael
Publicado 2015