Conditional toxicity and synergy drive diversity among antibacterial effectors

por LaCourse, Kaitlyn D., Peterson, S. Brook, Kulasekara, Hemantha D., Radey, Matthew C., Kim, Jungyun, Mougous, Joseph D.
Publicado 2018

GUTSS: An Alignment-Free Sequence Comparison Method for Use in Human Intestinal Microbiome and Fecal Microbiota Transplantation Analysis

por Brittnacher, Mitchell J., Heltshe, Sonya L., Hayden, Hillary S., Radey, Matthew C., Weiss, Eli J., Damman, Christopher J., Zisman, Timothy L., Suskind, David L., Miller, Samuel I.
Publicado 2016

Human gut bacteria harbor acquired interbacterial defense systems

por Ross, Benjamin D., Verster, Adrian J., Radey, Matthew C., Schmidtke, Danica T., Pope, Christopher E., Hoffman, Lucas R., Hajjar, Adeline M., Peterson, S. Brook, Borenstein, Elhanan, Mougous, Joseph D.
Publicado 2019

Staphylococcus aureus Protein A Mediates Interspecies Interactions at the Cell Surface of Pseudomonas aeruginosa

por Armbruster, Catherine R., Wolter, Daniel J., Mishra, Meenu, Hayden, Hillary S., Radey, Matthew C., Merrihew, Gennifer, MacCoss, Michael J., Burns, Jane, Wozniak, Daniel J., Parsek, Matthew R., Hoffman, Lucas R.
Publicado 2016

A population-level strain genotyping method to study pathogen strain dynamics in human infections

por Morgan, Sarah J., Durfey, Samantha L., Ravishankar, Sumedha, Jorth, Peter, Ni, Wendy, Skerrett, Duncan T., Aitken, Moira L., McKone, Edward F., Salipante, Stephen J., Radey, Matthew C., Singh, Pradeep K.
Publicado 2021

Genome Capture Sequencing Selectively Enriches Bacterial DNA and Enables Genome-Wide Measurement of Intrastrain Genetic Diversity in Human Infections

por Hayden, Hillary S., Joshi, Snehal, Radey, Matthew C., Vo, Anh T., Forsberg, Cara, Morgan, Sarah J., Waalkes, Adam, Holmes, Elizabeth A., Klee, Sara M., Emond, Mary J., Singh, Pradeep K., Salipante, Stephen J.
Publicado 2022

An interbacterial DNA deaminase toxin directly mutagenizes surviving target populations

por de Moraes, Marcos H, Hsu, FoSheng, Huang, Dean, Bosch, Dustin E, Zeng, Jun, Radey, Matthew C, Simon, Noah, Ledvina, Hannah E, Frick, Jacob P, Wiggins, Paul A, Peterson, S Brook, Mougous, Joseph D
Publicado 2021

Metagenomic evidence for taxonomic dysbiosis and functional imbalance in the gastrointestinal tracts of children with cystic fibrosis

por Manor, Ohad, Levy, Roie, Pope, Christopher E., Hayden, Hillary S., Brittnacher, Mitchell J., Carr, Rogan, Radey, Matthew C., Hager, Kyle R., Heltshe, Sonya L., Ramsey, Bonnie W., Miller, Samuel I., Hoffman, Lucas R., Borenstein, Elhanan
Publicado 2016

A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing

por Mok, Beverly Y., de Moraes, Marcos H., Zeng, Jun, Bosch, Dustin E., Kotrys, Anna V., Raguram, Aditya, Hsu, FoSheng, Radey, Matthew C., Peterson, S. Brook, Mootha, Vamsi K., Mougous, Joseph D., Liu, David R.
Publicado 2020

Multi-drug resistant non-typhoidal Salmonella associated with invasive disease in western Kenya

por Akullian, Adam, Montgomery, Joel M., John-Stewart, Grace, Miller, Samuel I., Hayden, Hillary S., Radey, Matthew C., Hager, Kyle R., Verani, Jennifer R., Ochieng, John Benjamin, Juma, Jane, Katieno, Jim, Fields, Barry, Bigogo, Godfrey, Audi, Allan, Walson, Judd
Publicado 2018

Human and Extracellular DNA Depletion for Metagenomic Analysis of Complex Clinical Infection Samples Yields Optimized Viable Microbiome Profiles

por Nelson, Maria T., Pope, Christopher E., Marsh, Robyn L., Wolter, Daniel J., Weiss, Eli J., Hager, Kyle R., Vo, Anh T., Brittnacher, Mitchell J., Radey, Matthew C., Hayden, Hillary S., Eng, Alexander, Miller, Samuel I., Borenstein, Elhanan, Hoffman, Lucas R.
Publicado 2019

A broadly distributed toxin family mediates contact-dependent antagonism between gram-positive bacteria

por Whitney, John C, Peterson, S Brook, Kim, Jungyun, Pazos, Manuel, Verster, Adrian J, Radey, Matthew C, Kulasekara, Hemantha D, Ching, Mary Q, Bullen, Nathan P, Bryant, Diane, Goo, Young Ah, Surette, Michael G, Borenstein, Elhanan, Vollmer, Waldemar, Mougous, Joseph D
Publicado 2017

Genetic manipulation of candidate phyla radiation bacteria provides functional insights into microbial dark matter

por Wang, Yaxi, Gallagher, Larry A., Andrade, Pia A., Liu, Andi, Humphreys, Ian R., Turkarslan, Serdar, Cutler, Kevin J., Arrieta-Ortiz, Mario L., Li, Yaqiao, Radey, Matthew C., McLean, Jeffrey S., Cong, Qian, Baker, David, Baliga, Nitin S., Peterson, S. Brook, Mougous, Joseph D.
Publicado 2023

Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle

por Wang, Yaxi, Gallagher, Larry A., Andrade, Pia A., Liu, Andi, Humphreys, Ian R., Turkarslan, Serdar, Cutler, Kevin J., Arrieta-Ortiz, Mario L., Li, Yaqiao, Radey, Matthew C., McLean, Jeffrey S., Cong, Qian, Baker, David, Baliga, Nitin S., Peterson, S. Brook, Mougous, Joseph D.
Publicado 2023

Combining Ivacaftor and Intensive Antibiotics Achieves Limited Clearance of Cystic Fibrosis Infections

por Durfey, Samantha L., Pipavath, Sudhakar, Li, Anna, Vo, Anh T., Ratjen, Anina, Carter, Suzanne, Morgan, Sarah J., Radey, Matthew C., Grogan, Brenda, Salipante, Stephen J., Welsh, Michael J., Stoltz, David A., Goss, Christopher H., McKone, Edward F., Singh, Pradeep K.
Publicado 2021

Discovery of coordinately regulated pathways that provide innate protection against interbacterial antagonism

por Ting, See-Yeun, LaCourse, Kaitlyn D, Ledvina, Hannah E, Zhang, Rutan, Radey, Matthew C, Kulasekara, Hemantha D, Somavanshi, Rahul, Bertolli, Savannah K, Gallagher, Larry A, Kim, Jennifer, Penewit, Kelsi M, Salipante, Stephen J, Xu, Libin, Peterson, S Brook, Mougous, Joseph D
Publicado 2022

Genomic Analysis of Salmonella enterica Serovar Typhimurium Characterizes Strain Diversity for Recent U.S. Salmonellosis Cases and Identifies Mutations Linked to Loss of Fitness un...

por Hayden, Hillary S., Matamouros, Susana, Hager, Kyle R., Brittnacher, Mitchell J., Rohmer, Laurence, Radey, Matthew C., Weiss, Eli J., Kim, Katie B., Jacobs, Michael A., Sims-Day, Elizabeth H., Yue, Min, Zaidi, Mussaret B., Schifferli, Dieter M., Manning, Shannon D., Walson, Judd L., Miller, Samuel I.
Publicado 2016

Genome-wide protein–DNA interaction site mapping in bacteria using a double-stranded DNA-specific cytosine deaminase

por Gallagher, Larry A., Velazquez, Elena, Peterson, S. Brook, Charity, James C., Radey, Matthew C., Gebhardt, Michael J., Hsu, FoSheng, Shull, Lauren M., Cutler, Kevin J., Macareno, Keven, de Moraes, Marcos H., Penewit, Kelsi M., Kim, Jennifer, Andrade, Pia A., LaFramboise, Thomas, Salipante, Stephen J., Reniere, Michelle L., de Lorenzo, Victor, Wiggins, Paul A., Dove, Simon L., Mougous, Joseph D.
Publicado 2022