Smash and DASH with Cas9

por Ramani, Vijay, Shendure, Jay
Publicado 2016

High-throughput determination of RNA structure by proximity ligation

por Ramani, Vijay, Qiu, Ruolan, Shendure, Jay
Publicado 2015

Understanding Spatial Genome Organization: Methods and Insights

por Ramani, Vijay, Shendure, Jay, Duan, Zhijun
Publicado 2016

High Sensitivity Profiling of Chromatin Structure by MNase-SSP

por Ramani, Vijay, Qiu, Ruolan, Shendure, Jay
Publicado 2019

TLR4-interacting SPA4 peptide improves host defense and alleviates tissue injury in a mouse model of Pseudomonas aeruginosa lung infection

por Awasthi, Shanjana, Singh, Bhupinder, Ramani, Vijay, Xie, Jun, Kosanke, Stanley
Publicado 2019

A Germline Point Mutation in the MYC-FBW7 Phosphodegron Initiates Hematopoietic Malignancies

por Freie, Brian, Carroll, Patrick A., Varnum-Finney, Barbara J., Ramani, Vijay, Bernstein, Irwin, Eisenman, Robert N.
Publicado 2023

Cobalt-Based Coordination Polymer for Oxygen Reduction Reaction

por Mani, Prabu, Sheelam, Anjaiah, Das, Shubhajit, Wang, Guanxiong, Ramani, Vijay K., Ramanujam, Kothandaraman, Pati, Swapan K., Mandal, Sukhendu
Publicado 2018

Massively multiplex single-cell Hi-C

por Ramani, Vijay, Deng, Xinxian, Qiu, Ruolan, Gunderson, Kevin L, Steemers, Frank J, Disteche, Christine M, Noble, William S, Duan, Zhijun, Shendure, Jay
Publicado 2017

NF1 heterozygosity fosters de novo tumorigenesis but impairs malignant transformation

por Brosseau, Jean-Philippe, Liao, Chung-Ping, Wang, Yong, Ramani, Vijay, Vandergriff, Travis, Lee, Michelle, Patel, Amisha, Ariizumi, Kiyoshi, Le, Lu Q.
Publicado 2018

Dynamics of genome reorganization during human cardiogenesis reveal an RBM20-dependent splicing factory

por Bertero, Alessandro, Fields, Paul A., Ramani, Vijay, Bonora, Giancarlo, Yardimci, Galip G., Reinecke, Hans, Pabon, Lil, Noble, William S., Shendure, Jay, Murry, Charles E.
Publicado 2019

Dendritic cell therapy augments antitumor immunity triggered by CDK4/6 inhibition and immune checkpoint blockade by unleashing systemic CD4 T-cell responses

por Kumar, Amrendra, Ramani, Vijay, Bharti, Vijaya, de Lima Bellan, Daniel, Saleh, Nabil, Uzhachenko, Roman, Shen, Chengli, Arteaga, Carlos, Richmond, Ann, Reddy, Sangeetha M, Vilgelm, Anna
Publicado 2023

Bipartite structure of the inactive mouse X chromosome

por Deng, Xinxian, Ma, Wenxiu, Ramani, Vijay, Hill, Andrew, Yang, Fan, Ay, Ferhat, Berletch, Joel B., Blau, Carl Anthony, Shendure, Jay, Duan, Zhijun, Noble, William S., Disteche, Christine M.
Publicado 2015

Mechanism of Anti-Inflammatory Activity of TLR4-Interacting SPA4 Peptide

por Awasthi, Shanjana, Kumar, Gaurav, Ramani, Vijay, Awasthi, Vibhudutta, Rodgers, Karla K., Xie, Jun, Beierle, Jacob, Kyere-Davies, Gertrude, Singh, Bhupinder, Rahman, Negar, Chowdhury, Asif Alam, Chataut, Neha
Publicado 2021

Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data

por Kim, Hyeon-Jin, Yardımcı, Galip Gürkan, Bonora, Giancarlo, Ramani, Vijay, Liu, Jie, Qiu, Ruolan, Lee, Choli, Hesson, Jennifer, Ware, Carol B., Shendure, Jay, Duan, Zhijun, Noble, William Stafford
Publicado 2020

Massively multiplex single-molecule oligonucleosome footprinting

por Abdulhay, Nour J, McNally, Colin P, Hsieh, Laura J, Kasinathan, Sivakanthan, Keith, Aidan, Estes, Laurel S, Karimzadeh, Mehran, Underwood, Jason G, Goodarzi, Hani, Narlikar, Geeta J, Ramani, Vijay
Publicado 2020

Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation

por Bonora, Giancarlo, Ramani, Vijay, Singh, Ritambhara, Fang, He, Jackson, Dana L., Srivatsan, Sanjay, Qiu, Ruolan, Lee, Choli, Trapnell, Cole, Shendure, Jay, Duan, Zhijun, Deng, Xinxian, Noble, William S., Disteche, Christine M.
Publicado 2021

Nucleosome density shapes kilobase-scale regulation by a mammalian chromatin remodeler

por Abdulhay, Nour J., Hsieh, Laura J., McNally, Colin P., Ostrowski, Megan S., Moore, Camille M., Ketavarapu, Mythili, Kasinathan, Sivakanthan, Nanda, Arjun S., Wu, Ke, Chio, Un Seng, Zhou, Ziling, Goodarzi, Hani, Narlikar, Geeta J., Ramani, Vijay
Publicado 2023

The glucose-sensing transcription factor MLX balances metabolism and stress to suppress apoptosis and maintain spermatogenesis

por Carroll, Patrick A., Freie, Brian W., Cheng, Pei Feng, Kasinathan, Sivakanthan, Gu, Haiwei, Hedrich, Theresa, Dowdle, James A., Venkataramani, Vivek, Ramani, Vijay, Wu, Xiaoying, Raftery, Daniel, Shendure, Jay, Ayer, Donald E., Muller, Charles H., Eisenman, Robert N.
Publicado 2021

Genomic Evaluation of Multiparametric Magnetic Resonance Imaging-visible and -nonvisible Lesions in Clinically Localised Prostate Cancer

por Parry, Marina A., Srivastava, Shambhavi, Ali, Adnan, Cannistraci, Alessio, Antonello, Jenny, Barros-Silva, João Diogo, Ubertini, Valentina, Ramani, Vijay, Lau, Maurice, Shanks, Jonathan, Nonaka, Daisuke, Oliveira, Pedro, Hambrock, Thomas, Leong, Hui Sun, Dhomen, Nathalie, Miller, Crispin, Brady, Ged, Dive, Caroline, Clarke, Noel W., Marais, Richard, Baena, Esther
Publicado 2019

MRE11 as a Predictive Biomarker of Outcome After Radiation Therapy in Bladder Cancer

por Walker, Alexandra K., Karaszi, Katalin, Valentine, Helen, Strauss, Victoria Y., Choudhury, Ananya, McGill, Shaun, Wen, Kaisheng, Brown, Michael D., Ramani, Vijay, Bhattarai, Selina, Teo, Mark T.W., Yang, Lingjian, Myers, Kevin A., Deshmukh, Nayneeta, Denley, Helen, Browning, Lisa, Love, Sharon B., Iyer, Gopa, Clarke, Noel W., Hall, Emma, Huddart, Robert, James, Nicholas D., Hoskin, Peter J., West, Catharine M.L., Kiltie, Anne E.
Publicado 2019