Immunopeptidogenomics: Harnessing RNA-Seq to Illuminate the Dark Immunopeptidome

por Scull, Katherine E., Pandey, Kirti, Ramarathinam, Sri H., Purcell, Anthony W.
Publicado 2021

Stable isotope shifted matrices enable the use of low mass ion precursor scanning for targeted metabolite identification

por Reilly, Charles B, Ramarathinam, Sri H, Williamson, Nicholas A, Purcell, Anthony W
Publicado 2011

HIVed, a knowledgebase for differentially expressed human genes and proteins during HIV infection, replication and latency

por Li, Chen, Ramarathinam, Sri H., Revote, Jerico, Khoury, Georges, Song, Jiangning, Purcell, Anthony W.
Publicado 2017

The differentiation state of the Schwann cell progenitor drives phenotypic variation between two contagious cancers

por Owen, Rachel S., Ramarathinam, Sri H., Bailey, Alistair, Gastaldello, Annalisa, Hussey, Kathryn, Skipp, Paul J., Purcell, Anthony W., Siddle, Hannah V.
Publicado 2021

The immunopeptidomes of two transmissible cancers and their host have a common, dominant peptide motif

por Gastaldello, Annalisa, Ramarathinam, Sri H., Bailey, Alistair, Owen, Rachel, Turner, Steven, Kontouli, N., Elliott, Tim, Skipp, Paul, Purcell, Anthony W., Siddle, Hannah V.
Publicado 2021

The RNA-Binding Proteins SRP14 and HMGB3 Control HIV-1 Tat mRNA Processing and Translation During HIV-1 Latency

por Khoury, Georges, Lee, Michelle Y., Ramarathinam, Sri H., McMahon, James, Purcell, Anthony W., Sonza, Secondo, Lewin, Sharon R., Purcell, Damian F. J.
Publicado 2021

Thermostability profiling of MHC-bound peptides: a new dimension in immunopeptidomics and aid for immunotherapy design

por Jappe, Emma C., Garde, Christian, Ramarathinam, Sri H., Passantino, Ethan, Illing, Patricia T., Mifsud, Nicole A., Trolle, Thomas, Kringelum, Jens V., Croft, Nathan P., Purcell, Anthony W.
Publicado 2020

Endogenous H3.3K27M derived peptide restricted to HLA-A∗02:01 is insufficient for immune-targeting in diffuse midline glioma

por Wang, Stacie S., Pandey, Kirti, Watson, Katherine A., Abbott, Rebecca C., Mifsud, Nicole A., Gracey, Fiona M., Ramarathinam, Sri H., Cross, Ryan S., Purcell, Anthony W., Jenkins, Misty R.
Publicado 2023

Immunolyser: A web-based computational pipeline for analysing and mining immunopeptidomic data

por Munday, Prithvi Raj, Fehring, Joshua, Revote, Jerico, Pandey, Kirti, Shahbazy, Mohammad, Scull, Katherine E., Ramarathinam, Sri H., Faridi, Pouya, Croft, Nathan P., Braun, Asolina, Li, Chen, Purcell, Anthony W.
Publicado 2023

A combined immunopeptidomics, proteomics, and cell surface proteomics approach to identify immunotherapy targets for diffuse intrinsic pontine glioma

por Pandey, Kirti, Wang, Stacie S., Mifsud, Nicole A., Faridi, Pouya, Davenport, Alexander J., Webb, Andrew I., Sandow, Jarrod J., Ayala, Rochelle, Monje, Michelle, Cross, Ryan S., Ramarathinam, Sri H., Jenkins, Misty R., Purcell, Anthony W.
Publicado 2023

An open-source computational and data resource to analyze digital maps of immunopeptidomes

por Caron, Etienne, Espona, Lucia, Kowalewski, Daniel J, Schuster, Heiko, Ternette, Nicola, Alpízar, Adán, Schittenhelm, Ralf B, Ramarathinam, Sri H, Lindestam Arlehamn, Cecilia S, Chiek Koh, Ching, Gillet, Ludovic C, Rabsteyn, Armin, Navarro, Pedro, Kim, Sangtae, Lam, Henry, Sturm, Theo, Marcilla, Miguel, Sette, Alessandro, Campbell, David S, Deutsch, Eric W, Moritz, Robert L, Purcell, Anthony W, Rammensee, Hans-Georg, Stevanovic, Stefan, Aebersold, Ruedi
Publicado 2015