In Silico Evidence of the Multifunctional Features of Lactiplantibacillus pentosus LPG1, a Natural Fermenting Agent Isolated from Table Olive Biofilms

por López-García, Elio, Benítez-Cabello, Antonio, Ramiro-García, Javier, Ladero, Victor, Arroyo-López, Francisco Noé
Publicado 2023

Effect of Nickel and Cobalt on Methanogenic Enrichment Cultures and Role of Biogenic Sulfide in Metal Toxicity Attenuation

por Paulo, Lara M., Ramiro-Garcia, Javier, van Mourik, Simon, Stams, Alfons J. M., Sousa, Diana Z.
Publicado 2017

Dechlorination of three tetrachlorobenzene isomers by contaminated harbor sludge-derived enrichment cultures follows thermodynamically favorable reactions

por Lu, Yue, Ramiro-Garcia, Javier, Vandermeeren, Pieter, Herrmann, Steffi, Cichocka, Danuta, Springael, Dirk, Atashgahi, Siavash, Smidt, Hauke
Publicado 2016

Probiotic legacy effects on gut microbial assembly in tilapia larvae

por Giatsis, Christos, Sipkema, Detmer, Ramiro-Garcia, Javier, Bacanu, Gianina M., Abernathy, Jason, Verreth, Johan, Smidt, Hauke, Verdegem, Marc
Publicado 2016

Growth and activity of ANME clades with different sulfate and sulfide concentrations in the presence of methane

por Timmers, Peer H. A., Widjaja-Greefkes, H. C. A., Ramiro-Garcia, Javier, Plugge, Caroline M., Stams, Alfons J. M.
Publicado 2015

NG-Tax, a highly accurate and validated pipeline for analysis of 16S rRNA amplicons from complex biomes

por Ramiro-Garcia, Javier, Hermes, Gerben D. A., Giatsis, Christos, Sipkema, Detmer, Zoetendal, Erwin G., Schaap, Peter J., Smidt, Hauke
Publicado 2018

New Insights into Microbial Diversity of the Traditional Packed Table Olives Aloreña de Málaga through Metataxonomic Analysis

por López-García, Elio, Benítez-Cabello, Antonio, Ramiro-García, Javier, Romero-Gil, Verónica, Rodríguez-Gómez, Francisco, Arroyo-López, Francisco Noé
Publicado 2021

Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment

por Carrión, Ornella, Larke-Mejía, Nasmille L., Gibson, Lisa, Farhan Ul Haque, Muhammad, Ramiro-García, Javier, McGenity, Terry J., Murrell, J. Colin
Publicado 2018

Microbial Community Redundancy and Resilience Underpins High-Rate Anaerobic Treatment of Dairy-Processing Wastewater at Ambient Temperatures

por Paulo, Lara M., Castilla-Archilla, Juan, Ramiro-Garcia, Javier, Escamez-Picón, José Antonio, Hughes, Dermot, Mahony, Thérèse, Murray, Michael, Wilmes, Paul, O'Flaherty, Vincent
Publicado 2020

A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets

por Leimena, Milkha M, Ramiro-Garcia, Javier, Davids, Mark, van den Bogert, Bartholomeus, Smidt, Hauke, Smid, Eddy J, Boekhorst, Jos, Zoetendal, Erwin G, Schaap, Peter J, Kleerebezem, Michiel
Publicado 2013

Dietary protein sources differentially affect microbiota, mTOR activity and transcription of mTOR signaling pathways in the small intestine

por Kar, Soumya K., Jansman, Alfons J. M., Benis, Nirupama, Ramiro-Garcia, Javier, Schokker, Dirkjan, Kruijt, Leo, Stolte, Ellen H., Taverne-Thiele, Johanna J., Smits, Mari A., Wells, Jerry M.
Publicado 2017

Metagenomic- and Cultivation-Based Exploration of Anaerobic Chloroform Biotransformation in Hypersaline Sediments as Natural Source of Chloromethanes

por Peng, Peng, Lu, Yue, Bosma, Tom N.P., Nijenhuis, Ivonne, Nijsse, Bart, Shetty, Sudarshan A., Ruecker, Alexander, Umanets, Alexander, Ramiro-Garcia, Javier, Kappler, Andreas, Sipkema, Detmer, Smidt, Hauke, Atashgahi, Siavash
Publicado 2020

A novel biomarker panel for irritable bowel syndrome and the application in the general population

por Mujagic, Zlatan, Tigchelaar, Ettje F., Zhernakova, Alexandra, Ludwig, Thomas, Ramiro-Garcia, Javier, Baranska, Agnieszka, Swertz, Morris A., Masclee, Ad A. M., Wijmenga, Cisca, van Schooten, Frederik J., Smolinska, Agnieszka, Jonkers, Daisy M. A. E.
Publicado 2016

Mining microbial metatranscriptomes for expression of antibiotic resistance genes under natural conditions

por Versluis, Dennis, D’Andrea, Marco Maria, Ramiro Garcia, Javier, Leimena, Milkha M., Hugenholtz, Floor, Zhang, Jing, Öztürk, Başak, Nylund, Lotta, Sipkema, Detmer, Schaik, Willem van, de Vos, Willem M., Kleerebezem, Michiel, Smidt, Hauke, Passel, Mark W.J. van
Publicado 2015

Systematic characterization of human gut microbiome-secreted molecules by integrated multi-omics

por De Saedeleer, Bianca, Malabirade, Antoine, Ramiro-Garcia, Javier, Habier, Janine, Trezzi, Jean-Pierre, Peters, Samantha L., Daujeumont, Annegrät, Halder, Rashi, Jäger, Christian, Busi, Susheel Bhanu, May, Patrick, Oertel, Wolfgang, Mollenhauer, Brit, Laczny, Cédric C., Hettich, Robert L., Wilmes, Paul
Publicado 2021

Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential

por Wampach, Linda, Heintz-Buschart, Anna, Fritz, Joëlle V., Ramiro-Garcia, Javier, Habier, Janine, Herold, Malte, Narayanasamy, Shaman, Kaysen, Anne, Hogan, Angela H., Bindl, Lutz, Bottu, Jean, Halder, Rashi, Sjöqvist, Conny, May, Patrick, Andersson, Anders F., de Beaufort, Carine, Wilmes, Paul
Publicado 2018