Genome-Based Analysis of Enterococcus faecium Bacteremia Associated with Recurrent and Mixed-Strain Infection

por Raven, Kathy E., Gouliouris, Theodore, Parkhill, Julian, Peacock, Sharon J.
Publicado 2018

Are commercial providers a viable option for clinical bacterial sequencing?

por Raven, Kathy, Blane, Beth, Churcher, Carol, Parkhill, Julian, Peacock, Sharon J.
Publicado 2018

Rapid sequencing of MRSA direct from clinical plates in a routine microbiology laboratory

por Blane, Beth, Raven, Kathy E, Leek, Danielle, Brown, Nicholas, Parkhill, Julian, Peacock, Sharon J
Publicado 2019

A common protocol for the simultaneous processing of multiple clinically relevant bacterial species for whole genome sequencing

por Raven, Kathy E., Girgis, Sophia T., Akram, Asha, Blane, Beth, Leek, Danielle, Brown, Nicholas, Peacock, Sharon J.
Publicado 2021

Defining metrics for whole-genome sequence analysis of MRSA in clinical practice

por Raven, Kathy E., Blane, Beth, Kumar, Narender, Leek, Danielle, Bragin, Eugene, Coll, Francesc, Parkhill, Julian, Peacock, Sharon J.
Publicado 2020

Genomic surveillance of Escherichia coli in municipal wastewater treatment plants as an indicator of clinically relevant pathogens and their resistance genes

por Raven, Kathy E., Ludden, Catherine, Gouliouris, Theodore, Blane, Beth, Naydenova, Plamena, Brown, Nicholas M., Parkhill, Julian, Peacock, Sharon J.
Publicado 2019

PowerBacGWAS: a computational pipeline to perform power calculations for bacterial genome-wide association studies

por Coll, Francesc, Gouliouris, Theodore, Bruchmann, Sebastian, Phelan, Jody, Raven, Kathy E., Clark, Taane G., Parkhill, Julian, Peacock, Sharon J.
Publicado 2022

Whole-genome sequencing reveals transmission of vancomycin-resistant Enterococcus faecium in a healthcare network

por Brodrick, Hayley J., Raven, Kathy E., Harrison, Ewan M., Blane, Beth, Reuter, Sandra, Török, M. Estée, Parkhill, Julian, Peacock, Sharon J.
Publicado 2016

A decade of genomic history for healthcare-associated Enterococcus faecium in the United Kingdom and Ireland

por Raven, Kathy E., Reuter, Sandra, Reynolds, Rosy, Brodrick, Hayley J., Russell, Julie E., Török, M. Estée, Parkhill, Julian, Peacock, Sharon J.
Publicado 2016

Evaluation of a fully automated bioinformatics tool to predict antibiotic resistance from MRSA genomes

por Kumar, Narender, Raven, Kathy E, Blane, Beth, Leek, Danielle, Brown, Nicholas M, Bragin, Eugene, Rhodes, Paul A, Parkhill, Julian, Peacock, Sharon J
Publicado 2020

Methodology for Whole-Genome Sequencing of Methicillin-Resistant Staphylococcus aureus Isolates in a Routine Hospital Microbiology Laboratory

por Raven, Kathy E., Blane, Beth, Leek, Danielle, Churcher, Carol, Kokko-Gonzales, Paula, Pugazhendhi, Dhamayanthi, Fraser, Louise, Betley, Jason, Parkhill, Julian, Peacock, Sharon J.
Publicado 2019

Complex Routes of Nosocomial Vancomycin-Resistant Enterococcus faecium Transmission Revealed by Genome Sequencing

por Raven, Kathy E., Gouliouris, Theodore, Brodrick, Hayley, Coll, Francesc, Brown, Nicholas M., Reynolds, Rosy, Reuter, Sandra, Török, M. Estée, Parkhill, Julian, Peacock, Sharon J.
Publicado 2017

Whole genome sequencing of ESBL-producing Escherichia coli isolated from patients, farm waste and canals in Thailand

por Runcharoen, Chakkaphan, Raven, Kathy E., Reuter, Sandra, Kallonen, Teemu, Paksanont, Suporn, Thammachote, Jeeranan, Anun, Suthatip, Blane, Beth, Parkhill, Julian, Peacock, Sharon J., Chantratita, Narisara
Publicado 2017

Longitudinal genomic surveillance of multidrug-resistant Escherichia coli carriage in a long-term care facility in the United Kingdom

por Brodrick, Hayley J., Raven, Kathy E., Kallonen, Teemu, Jamrozy, Dorota, Blane, Beth, Brown, Nicholas M., Martin, Veronique, Török, M. Estée, Parkhill, Julian, Peacock, Sharon J.
Publicado 2017

Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis

por Coll, Francesc, Raven, Kathy E, Knight, Gwenan M, Blane, Beth, Harrison, Ewan M, Leek, Danielle, Enoch, David A, Brown, Nicholas M, Parkhill, Julian, Peacock, Sharon J
Publicado 2020

Comparison of two chromogenic media for the detection of vancomycin-resistant enterococcal carriage by nursing home residents

por Gouliouris, Theodore, Blane, Beth, Brodrick, Hayley J., Raven, Kathy E., Ambridge, Kirsty E., Kidney, Angela D., Hadjirin, Nazreen F., Török, M. Estée, Limmathurotsakul, Direk, Peacock, Sharon J.
Publicado 2016

Duration of exposure to multiple antibiotics is associated with increased risk of VRE bacteraemia: a nested case-control study

por Gouliouris, Theodore, Warne, Ben, Cartwright, Edward J P, Bedford, Luke, Weerasuriya, Chathika K, Raven, Kathy E, Brown, Nick M, Török, M Estée, Limmathurotsakul, Direk, Peacock, Sharon J
Publicado 2018

Pilot Evaluation of a Fully Automated Bioinformatics System for Analysis of Methicillin-Resistant Staphylococcus aureus Genomes and Detection of Outbreaks

por Brown, Nicholas M., Blane, Beth, Raven, Kathy E., Kumar, Narender, Leek, Danielle, Bragin, Eugene, Rhodes, Paul A., Enoch, David A., Thaxter, Rachel, Parkhill, Julian, Peacock, Sharon J.
Publicado 2019

Large-Scale Evaluation of a Rapid Fully Automated Analysis Platform to Detect and Refute Outbreaks Based on MRSA Genome Comparisons

por Raven, Kathy E., Bragin, Eugene, Blane, Beth, Leek, Danielle, Kumar, Narender, Rhodes, Paul A., Enoch, David A., Thaxter, Rachel, Brown, Nicholas M., Parkhill, Julian, Peacock, Sharon J.
Publicado 2022

Detection of vancomycin-resistant Enterococcus faecium hospital-adapted lineages in municipal wastewater treatment plants indicates widespread distribution and release into the env...

por Gouliouris, Theodore, Raven, Kathy E., Moradigaravand, Danesh, Ludden, Catherine, Coll, Francesc, Blane, Beth, Naydenova, Plamena, Horner, Carolyne, Brown, Nicholas M., Corander, Jukka, Limmathurotsakul, Direk, Parkhill, Julian, Peacock, Sharon J.
Publicado 2019