A regulatory cascade of three transcription factors in a single specific neuron, DVC, in Caenorhabditis elegans

por Feng, Huiyun, Reece-Hoyes, John S., Walhout, Albertha J.M., Hope, Ian A.
Publicado 2012

Multiple transcription factors directly regulate Hox gene lin-39 expression in ventral hypodermal cells of the C. elegans embryo and larva, including the hypodermal fate regulators...

por Liu, Wan-Ju, Reece-Hoyes, John S, Walhout, Albertha JM, Eisenmann, David M
Publicado 2014

A compendium of Caenhorabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networks

por Reece-Hoyes, John S, Deplancke, Bart, Shingles, Jane, Grove, Christian A, Hope, Ian A, Walhout, Albertha JM
Publicado 2005

Insight into transcription factor gene duplication from Caenorhabditis elegans Promoterome-driven expression patterns

por Reece-Hoyes, John S, Shingles, Jane, Dupuy, Denis, Grove, Christian A, Walhout, Albertha JM, Vidal, Marc, Hope, Ian A
Publicado 2007

Transcription factor binding to Caenorhabditis elegans first introns reveals lack of redundancy with gene promoters

por Fuxman Bass, Juan I., Tamburino, Alex M., Mori, Akihiro, Beittel, Nathan, Weirauch, Matthew T., Reece-Hoyes, John S., Walhout, Albertha J. M.
Publicado 2014

Enhanced yeast one-hybrid (eY1H) assays for high-throughput gene-centered regulatory network mapping

por Reece-Hoyes, John S, Diallo, Alos, Lajoie, Bryan, Kent, Amanda, Shrestha, Shaleen, Kadreppa, Sreenath, Pesyna, Colin, Dekker, Job, Myers, Chad L, Walhout, Albertha J M
Publicado 2011

A gene‐centered C. elegans protein–DNA interaction network provides a framework for functional predictions

por Fuxman Bass, Juan I, Pons, Carles, Kozlowski, Lucie, Reece‐Hoyes, John S, Shrestha, Shaleen, Holdorf, Amy D, Mori, Akihiro, Myers, Chad L, Walhout, Albertha JM
Publicado 2016

The C. elegans Snail homolog CES-1 can activate gene expression in vivo and share targets with bHLH transcription factors

por Reece-Hoyes, John S., Deplancke, Bart, Barrasa, M. Inmaculada, Hatzold, Julia, Smit, Ryan B., Arda, H. Efsun, Pope, Patricia A., Gaudet, Jeb, Conradt, Barbara, Walhout, Albertha J. M.
Publicado 2009

DamID in C. elegans reveals longevity-associated targets of DAF-16/FoxO

por Schuster, Eugene, McElwee, Joshua J, Tullet, Jennifer M A, Doonan, Ryan, Matthijssens, Filip, Reece-Hoyes, John S, Hope, Ian A, Vanfleteren, Jacques R, Thornton, Janet M, Gems, David
Publicado 2010

USP7 inhibits Wnt/β-catenin signaling through promoting stabilization of Axin

por Ji, Lei, Lu, Bo, Zamponi, Raffaella, Charlat, Olga, Aversa, Robert, Yang, Zinger, Sigoillot, Frederic, Zhu, Xiaoping, Hu, Tiancen, Reece-Hoyes, John S., Russ, Carsten, Michaud, Gregory, Tchorz, Jan S., Jiang, Xiaomo, Cong, Feng
Publicado 2019

Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities

por Narasimhan, Kamesh, Lambert, Samuel A, Yang, Ally WH, Riddell, Jeremy, Mnaimneh, Sanie, Zheng, Hong, Albu, Mihai, Najafabadi, Hamed S, Reece-Hoyes, John S, Fuxman Bass, Juan I, Walhout, Albertha JM, Weirauch, Matthew T, Hughes, Timothy R
Publicado 2015

Yeast one-hybrid assays for gene-centered human gene regulatory network mapping

por Reece-Hoyes, John S, Barutcu, A Rasim, McCord, Rachel Patton, Jeong, Jun Seop, Jiang, Lizhi, MacWilliams, Andrew, Yang, Xinping, Salehi-Ashtiani, Kourosh, Hill, David E, Blackshaw, Seth, Zhu, Heng, Dekker, Job, Walhout, Albertha J M
Publicado 2011

Identification of the HECT E3 ligase UBR5 as a regulator of MYC degradation using a CRISPR/Cas9 screen

por Schukur, Lina, Zimmermann, Tamara, Niewoehner, Ole, Kerr, Grainne, Gleim, Scott, Bauer-Probst, Beatrice, Knapp, Britta, Galli, Giorgio G., Liang, Xiaoyou, Mendiola, Angelica, Reece-Hoyes, John, Rapti, Melivoia, Barbosa, Ines, Reschke, Markus, Radimerski, Thomas, Thoma, Claudio R.
Publicado 2020

Multidimensional pooled shRNA screens in human THP-1 cells identify candidate modulators of macrophage polarization

por Surdziel, Ewa, Clay, Ieuan, Nigsch, Florian, Thiemeyer, Anke, Allard, Cyril, Hoffman, Gregory, Reece-Hoyes, John S., Phadke, Tanushree, Gambert, Romain, Keller, Caroline Gubser, Ludwig, Marie-Gabrielle, Baumgarten, Birgit, Frederiksen, Mathias, Schübeler, Dirk, Seuwen, Klaus, Bouwmeester, Tewis, Fodor, Barna D.
Publicado 2017

Genome-wide CRISPR screening reveals genetic modifiers of mutant EGFR dependence in human NSCLC

por Zeng, Hao, Castillo-Cabrera, Johnny, Manser, Mika, Lu, Bo, Yang, Zinger, Strande, Vaik, Begue, Damien, Zamponi, Raffaella, Qiu, Shumei, Sigoillot, Frederic, Wang, Qiong, Lindeman, Alicia, Reece-Hoyes, John S, Russ, Carsten, Bonenfant, Debora, Jiang, Xiaomo, Wang, Youzhen, Cong, Feng
Publicado 2019

Genome-wide CRISPR screen for PARKIN regulators reveals transcriptional repression as a determinant of mitophagy

por Potting, Christoph, Crochemore, Christophe, Moretti, Francesca, Nigsch, Florian, Schmidt, Isabel, Manneville, Carole, Carbone, Walter, Knehr, Judith, DeJesus, Rowena, Lindeman, Alicia, Maher, Rob, Russ, Carsten, McAllister, Gregory, Reece-Hoyes, John S., Hoffman, Gregory R., Roma, Guglielmo, Müller, Matthias, Sailer, Andreas W., Helliwell, Stephen B.
Publicado 2018

Cell adhesion molecule KIRREL1 is a feedback regulator of Hippo signaling recruiting SAV1 to cell-cell contact sites

por Paul, Atanu, Annunziato, Stefano, Lu, Bo, Sun, Tianliang, Evrova, Olivera, Planas-Paz, Lara, Orsini, Vanessa, Terracciano, Luigi M., Charlat, Olga, Loureiro, Zinger Yang, Ji, Lei, Zamponi, Raffaella, Sigoillot, Frederic, Lei, Hong, Lindeman, Alicia, Russ, Carsten, Reece-Hoyes, John S., Nicholson, Thomas B., Tchorz, Jan S., Cong, Feng
Publicado 2022

TRRAP is a central regulator of human multiciliated cell formation

por Wang, Zhao, Plasschaert, Lindsey W., Aryal, Shivani, Renaud, Nicole A., Yang, Zinger, Choo-Wing, Rayman, Pessotti, Angelica D., Kirkpatrick, Nathaniel D., Cochran, Nadire R., Carbone, Walter, Maher, Rob, Lindeman, Alicia, Russ, Carsten, Reece-Hoyes, John, McAllister, Gregory, Hoffman, Gregory R., Roma, Guglielmo, Jaffe, Aron B.
Publicado 2018

Genome-wide CRISPR screen identifies protein pathways modulating tau protein levels in neurons

por Sanchez, Carlos G., Acker, Christopher M., Gray, Audrey, Varadarajan, Malini, Song, Cheng, Cochran, Nadire R., Paula, Steven, Lindeman, Alicia, An, Shaojian, McAllister, Gregory, Alford, John, Reece-Hoyes, John, Russ, Carsten, Craig, Lucas, Capre, Ketthsy, Doherty, Christian, Hoffman, Gregory R., Luchansky, Sarah J., Polydoro, Manuela, Dolmetsch, Ricardo, Elwood, Fiona
Publicado 2021

An iron-dependent metabolic vulnerability underlies VPS34-dependence in RKO cancer cells

por Kobylarz, Marek J., Goodwin, Jonathan M., Kang, Zhao B., Annand, John W., Hevi, Sarah, O’Mahony, Ellen, McAllister, Gregory, Reece-Hoyes, John, Wang, Qiong, Alford, John, Russ, Carsten, Lindeman, Alicia, Beibel, Martin, Roma, Guglielmo, Carbone, Walter, Knehr, Judith, Loureiro, Joseph, Antczak, Christophe, Wiederschain, Dmitri, Murphy, Leon O., Menon, Suchithra, Nyfeler, Beat
Publicado 2020