Transform-MinER: transforming molecules in enzyme reactions

por Tyzack, Jonathan D, Ribeiro, Antonio J M, Borkakoti, Neera, Thornton, Janet M
Publicado 2018

Conformational Variation in Enzyme Catalysis: A Structural Study on Catalytic Residues

por Riziotis, Ioannis G., Ribeiro, António J.M., Borkakoti, Neera, Thornton, Janet M.
Publicado 2022

Ranking Enzyme Structures in the PDB by Bound Ligand Similarity to Biological Substrates

por Tyzack, Jonathan D., Fernando, Laurent, Ribeiro, Antonio J.M., Borkakoti, Neera, Thornton, Janet M.
Publicado 2018

EzMechanism: an automated tool to propose catalytic mechanisms of enzyme reactions

por Ribeiro, Antonio J. M., Riziotis, Ioannis G., Tyzack, Jonathan D., Borkakoti, Neera, Thornton, Janet M.
Publicado 2023

Using mechanism similarity to understand enzyme evolution

por Ribeiro, António J. M., Riziotis, Ioannis G., Tyzack, Jonathan D., Borkakoti, Neera, Thornton, Janet M.
Publicado 2022

Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites

por Ribeiro, António J M, Holliday, Gemma L, Furnham, Nicholas, Tyzack, Jonathan D, Ferris, Katherine, Thornton, Janet M
Publicado 2018

cuRRBS: simple and robust evaluation of enzyme combinations for reduced representation approaches

por Martin-Herranz, Daniel E., Ribeiro, António J. M., Krueger, Felix, Thornton, Janet M., Reik, Wolf, Stubbs, Thomas M.
Publicado 2017

GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphs

por Santana, Charles A, Izidoro, Sandro C, de Melo-Minardi, Raquel C, Tyzack, Jonathan D, Ribeiro, António J M, Pires, Douglas E V, Thornton, Janet M, de A. Silveira, Sabrina
Publicado 2022