Multiplexed imaging analysis of the tumor-immune microenvironment reveals predictors of outcome in triple-negative breast cancer

por Patwa, Aalok, Yamashita, Rikiya, Long, Jin, Risom, Tyler, Angelo, Michael, Keren, Leeat, Rubin, Daniel L.
Publicado 2021

Modeling differentiation-state transitions linked to therapeutic escape in triple-negative breast cancer

por Chapman, Margaret P., Risom, Tyler, Aswani, Anil J., Langer, Ellen M., Sears, Rosalie C., Tomlin, Claire J.
Publicado 2019

Correction: Modeling differentiation-state transitions linked to therapeutic escape in triple-negative breast cancer

por Chapman, Margaret P., Risom, Tyler, Aswani, Anil J., Langer, Ellen M., Sears, Rosalie C., Tomlin, Claire J.
Publicado 2019

Transcriptional signatures in histologic structures within glioblastoma tumors may predict personalized drug sensitivity and survival

por Kersch, Cymon N, Claunch, Cheryl J, Ambady, Prakash, Bucher, Elmar, Schwartz, Daniel L, Barajas, Ramon F, Iliff, Jeffrey J, Risom, Tyler, Heiser, Laura, Muldoon, Leslie L, Korkola, James E, Gray, Joe W, Neuwelt, Edward A
Publicado 2020

MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue structure

por Keren, Leeat, Bosse, Marc, Thompson, Steve, Risom, Tyler, Vijayaragavan, Kausalia, McCaffrey, Erin, Marquez, Diana, Angoshtari, Roshan, Greenwald, Noah F., Fienberg, Harris, Wang, Jennifer, Kambham, Neeraja, Kirkwood, David, Nolan, Garry, Montine, Thomas J., Galli, Stephen J., West, Robert, Bendall, Sean C., Angelo, Michael
Publicado 2019

Differentiation-state plasticity is a targetable resistance mechanism in basal-like breast cancer

por Risom, Tyler, Langer, Ellen M., Chapman, Margaret P., Rantala, Juha, Fields, Andrew J., Boniface, Christopher, Alvarez, Mariano J., Kendsersky, Nicholas D., Pelz, Carl R., Johnson-Camacho, Katherine, Dobrolecki, Lacey E., Chin, Koei, Aswani, Anil J., Wang, Nicholas J., Califano, Andrea, Lewis, Michael T., Tomlin, Claire J., Spellman, Paul T., Adey, Andrew, Gray, Joe W., Sears, Rosalie C.
Publicado 2018

Transition to invasive breast cancer is associated with progressive changes in the structure and composition of tumor stroma

por Risom, Tyler, Glass, David R., Averbukh, Inna, Liu, Candace C., Baranski, Alex, Kagel, Adam, McCaffrey, Erin F., Greenwald, Noah F., Rivero-Gutiérrez, Belén, Strand, Siri H., Varma, Sushama, Kong, Alex, Keren, Leeat, Srivastava, Sucheta, Zhu, Chunfang, Khair, Zumana, Veis, Deborah J., Deschryver, Katherine, Vennam, Sujay, Maley, Carlo, Hwang, E. Shelley, Marks, Jeffrey R., Bendall, Sean C., Colditz, Graham A., West, Robert B., Angelo, Michael
Publicado 2022

Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning

por Greenwald, Noah F., Miller, Geneva, Moen, Erick, Kong, Alex, Kagel, Adam, Dougherty, Thomas, Fullaway, Christine Camacho, McIntosh, Brianna J., Leow, Ke Xuan, Schwartz, Morgan Sarah, Pavelchek, Cole, Cui, Sunny, Camplisson, Isabella, Bar-Tal, Omer, Singh, Jaiveer, Fong, Mara, Chaudhry, Gautam, Abraham, Zion, Moseley, Jackson, Warshawsky, Shiri, Soon, Erin, Greenbaum, Shirley, Risom, Tyler, Hollmann, Travis, Bendall, Sean C., Keren, Leeat, Graf, William, Angelo, Michael, Van Valen, David
Publicado 2022

Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ: Analysis of TBCRC 038 and RAHBT cohorts

por Strand, Siri H., Rivero-Gutiérrez, Belén, Houlahan, Kathleen E., Seoane, Jose A., King, Lorraine M., Risom, Tyler, Simpson, Lunden A., Vennam, Sujay, Khan, Aziz, Cisneros, Luis, Hardman, Timothy, Harmon, Bryan, Couch, Fergus, Gallagher, Kristalyn, Kilgore, Mark, We, Shi, DeMichele, Angela, King, Tari, McAuliffe, Priscilla F., Nangia, Julie, Lee, Joanna, Tseng, Jennifer, Storniolo, Anna Maria, Thompson, Alastair M., Gupta, Gaorav P., Burns, Robyn, Veis, Deborah J., DeSchryver, Katherine, Zhu, Chunfang, Matusiak, Magdalena, Wang, Jason, Zhu, Shirley X., Tappenden, Jen, Ding, Daisy Yi, Zhang, Dadong, Luo, Jingqin, Jiang, Shu, Varma, Sushama, Anderson, Lauren, Straub, Cody, Srivastava, Sucheta, Curtis, Christina, Tibshirani, Rob, Angelo, Robert Michael, Hall, Allison, Owzar, Kouros, Polyak, Kornelia, Maley, Carlo, Marks, Jeffrey R., Colditz, Graham A., Shelley Hwang, E., West, Robert B.
Publicado 2023