LAPIS is a fast web API for massive open virus sequencing data

por Chen, Chaoran, Taepper, Alexander, Engelniederhammer, Fabian, Kellerer, Jonas, Roemer, Cornelius, Stadler, Tanja
Publicado 2023

CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants

por Chen, Chaoran, Nadeau, Sarah, Yared, Michael, Voinov, Philippe, Xie, Ning, Roemer, Cornelius, Stadler, Tanja
Publicado 2021

Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus

por Happi, Christian, Adetifa, Ifedayo, Mbala, Placide, Njouom, Richard, Nakoune, Emmanuel, Happi, Anise, Ndodo, Nnaemeka, Ayansola, Oyeronke, Mboowa, Gerald, Bedford, Trevor, Neher, Richard A., Roemer, Cornelius, Hodcroft, Emma, Tegally, Houriiyah, O’Toole, Áine, Rambaut, Andrew, Pybus, Oliver, Kraemer, Moritz U. G., Wilkinson, Eduan, Isidro, Joana, Borges, Vítor, Pinto, Miguel, Gomes, João Paulo, Freitas, Lucas, Resende, Paola C., Lee, Raphael T. C., Maurer-Stroh, Sebastian, Baxter, Cheryl, Lessells, Richard, Ogwell, Ahmed E., Kebede, Yenew, Tessema, Sofonias K., de Oliveira, Tulio
Publicado 2022

Rapid escape of new SARS-CoV-2 Omicron variants from BA.2-directed antibody responses

por Dijokaite-Guraliuc, Aiste, Das, Raksha, Zhou, Daming, Ginn, Helen M., Liu, Chang, Duyvesteyn, Helen M.E., Huo, Jiandong, Nutalai, Rungtiwa, Supasa, Piyada, Selvaraj, Muneeswaran, de Silva, Thushan I., Plowright, Megan, Newman, Thomas A.H., Hornsby, Hailey, Mentzer, Alexander J., Skelly, Donal, Ritter, Thomas G., Temperton, Nigel, Klenerman, Paul, Barnes, Eleanor, Dunachie, Susanna J., Roemer, Cornelius, Peacock, Thomas P., Paterson, Neil G., Williams, Mark A., Hall, David R., Fry, Elizabeth E., Mongkolsapaya, Juthathip, Ren, Jingshan, Stuart, David I., Screaton, Gavin R.
Publicado 2023

Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa

por Tegally, Houriiyah, Moir, Monika, Everatt, Josie, Giovanetti, Marta, Scheepers, Cathrine, Wilkinson, Eduan, Subramoney, Kathleen, Makatini, Zinhle, Moyo, Sikhulile, Amoako, Daniel G., Baxter, Cheryl, Althaus, Christian L., Anyaneji, Ugochukwu J., Kekana, Dikeledi, Viana, Raquel, Giandhari, Jennifer, Lessells, Richard J., Maponga, Tongai, Maruapula, Dorcas, Choga, Wonderful, Matshaba, Mogomotsi, Mbulawa, Mpaphi B., Msomi, Nokukhanya, Naidoo, Yeshnee, Pillay, Sureshnee, Sanko, Tomasz Janusz, San, James E., Scott, Lesley, Singh, Lavanya, Magini, Nonkululeko A., Smith-Lawrence, Pamela, Stevens, Wendy, Dor, Graeme, Tshiabuila, Derek, Wolter, Nicole, Preiser, Wolfgang, Treurnicht, Florette K., Venter, Marietjie, Chiloane, Georginah, McIntyre, Caitlyn, O’Toole, Aine, Ruis, Christopher, Peacock, Thomas P., Roemer, Cornelius, Kosakovsky Pond, Sergei L., Williamson, Carolyn, Pybus, Oliver G., Bhiman, Jinal N., Glass, Allison, Martin, Darren P., Jackson, Ben, Rambaut, Andrew, Laguda-Akingba, Oluwakemi, Gaseitsiwe, Simani, von Gottberg, Anne, de Oliveira, Tulio
Publicado 2022

Viral genetic clustering and transmission dynamics of the 2022 mpox outbreak in Portugal

por Borges, Vítor, Duque, Mariana Perez, Martins, João Vieira, Vasconcelos, Paula, Ferreira, Rita, Sobral, Daniel, Pelerito, Ana, de Carvalho, Isabel Lopes, Núncio, Maria Sofia, Borrego, Maria José, Roemer, Cornelius, Neher, Richard A., O’Driscoll, Megan, Rocha, Raquel, Lopo, Sílvia, Neves, Raquel, Palminha, Paula, Coelho, Luís, Nunes, Alexandra, Isidro, Joana, Pinto, Miguel, Santos, João Dourado, Mixão, Verónica, Santos, Daniela, Duarte, Silvia, Vieira, Luís, Martins, Fátima, Machado, Jorge, Veríssimo, Vítor Cabral, Grau, Berta, Peralta-Santos, André, Neves, José, Caldeira, Margarida, Pestana, Mafalda, Fernandes, Cândida, Caria, João, Pinto, Raquel, Póvoas, Diana, Maltez, Fernando, Sá, Ana Isabel, Salvador, Mafalda Brito, Teófilo, Eugénio, Rocha, Miguel, Moneti, Virginia, Duque, Luis Miguel, e Silva, Francisco Ferreira, Baptista, Teresa, Vasconcelos, Joana, Casanova, Sara, Mansinho, Kamal, Alves, João Vaz, Alves, João, Silva, António, Alpalhão, Miguel, Brazão, Cláudia, Sousa, Diogo, Filipe, Paulo, Pacheco, Patrícia, Peruzzu, Francesca, de Jesus, Rita Patrocínio, Ferreira, Luís, Mendez, Josefina, Jordão, Sofia, Duarte, Frederico, Gonçalves, Maria João, Pena, Eduarda, Silva, Claúdio Nunes, Guimarães, André Rodrigues, Tavares, Margarida, Freitas, Graça, Cordeiro, Rita, Gomes, João Paulo
Publicado 2023