The exon quantification pipeline (EQP): a comprehensive approach to the quantification of gene, exon and junction expression from RNA-seq data

por Schuierer, Sven, Roma, Guglielmo
Publicado 2016

HumMeth27QCReport: an R package for quality control and primary analysis of Illumina Infinium methylation data

por Mancuso, Francesco M, Montfort, Magda, Carreras, Anna, Alibés, Andreu, Roma, Guglielmo
Publicado 2011

Lack of Sik1 in Mouse Embryonic Stem Cells Impairs Cardiomyogenesis by Down-Regulating the Cyclin-Dependent Kinase Inhibitor p57(kip2)

por Romito, Antonio, Lonardo, Enza, Roma, Guglielmo, Minchiotti, Gabriella, Ballabio, Andrea, Cobellis, Gilda
Publicado 2010

The UniTrap resource: tools for the biologist enabling optimized use of gene trap clones

por Roma, Guglielmo, Sardiello, Marco, Cobellis, Gilda, Cruz, Pedro, Lago, Giampiero, Sanges, Remo, Stupka, Elia
Publicado 2008

A comprehensive assessment of RNA-seq protocols for degraded and low-quantity samples

por Schuierer, Sven, Carbone, Walter, Knehr, Judith, Petitjean, Virginie, Fernandez, Anita, Sultan, Marc, Roma, Guglielmo
Publicado 2017

PRGdb: a bioinformatics platform for plant resistance gene analysis

por Sanseverino, Walter, Roma, Guglielmo, De Simone, Marco, Faino, Luigi, Melito, Sara, Stupka, Elia, Frusciante, Luigi, Ercolano, Maria Raffaella
Publicado 2010

MyMpn: a database for the systems biology model organism Mycoplasma pneumoniae

por Wodke, Judith A. H., Alibés, Andreu, Cozzuto, Luca, Hermoso, Antonio, Yus, Eva, Lluch-Senar, Maria, Serrano, Luis, Roma, Guglielmo
Publicado 2014

PRGdb 2.0: towards a community-based database model for the analysis of R-genes in plants

por Sanseverino, Walter, Hermoso, Antonio, D’Alessandro, Raffaella, Vlasova, Anna, Andolfo, Giuseppe, Frusciante, Luigi, Lowy, Ernesto, Roma, Guglielmo, Ercolano, Maria Raffaella
Publicado 2013

A single cell atlas of the tracheal epithelium reveals the CFTR-rich pulmonary ionocyte

por Plasschaert, Lindsey W., Žilionis, Rapolas, Choo-Wing, Rayman, Savova, Virginia, Knehr, Judith, Roma, Guglielmo, Klein, Allon M., Jaffe, Aron B.
Publicado 2018

Fast and highly sensitive full-length single-cell RNA sequencing using FLASH-seq

por Hahaut, Vincent, Pavlinic, Dinko, Carbone, Walter, Schuierer, Sven, Balmer, Pierre, Quinodoz, Mathieu, Renner, Magdalena, Roma, Guglielmo, Cowan, Cameron S., Picelli, Simone
Publicado 2022

Comparative transcriptomics of early dipteran development

por Jiménez-Guri, Eva, Huerta-Cepas, Jaime, Cozzuto, Luca, Wotton, Karl R, Kang, Hui, Himmelbauer, Heinz, Roma, Guglielmo, Gabaldón, Toni, Jaeger, Johannes
Publicado 2013

SuperFly: a comparative database for quantified spatio-temporal gene expression patterns in early dipteran embryos

por Cicin-Sain, Damjan, Pulido, Antonio Hermoso, Crombach, Anton, Wotton, Karl R., Jiménez-Guri, Eva, Taly, Jean-François, Roma, Guglielmo, Jaeger, Johannes
Publicado 2014

YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers

por Stein, Claudia, Bardet, Anaïs Flore, Roma, Guglielmo, Bergling, Sebastian, Clay, Ieuan, Ruchti, Alexandra, Agarinis, Claudia, Schmelzle, Tobias, Bouwmeester, Tewis, Schübeler, Dirk, Bauer, Andreas
Publicado 2015

Genomic Analysis Revealed New Oncogenic Signatures in TP53-Mutant Hepatocellular Carcinoma

por Kancherla, Venkatesh, Abdullazade, Samir, Matter, Matthias S., Lanzafame, Manuela, Quagliata, Luca, Roma, Guglielmo, Hoshida, Yujin, Terracciano, Luigi M., Ng, Charlotte K. Y., Piscuoglio, Salvatore
Publicado 2018

MiR-210 promotes sensory hair cell formation in the organ of corti

por Riccardi, Sabrina, Bergling, Sebastian, Sigoillot, Frederic, Beibel, Martin, Werner, Annick, Leighton-Davies, Juliet, Knehr, Judith, Bouwmeester, Tewis, Parker, Christian N., Roma, Guglielmo, Kinzel, Bernd
Publicado 2016

A Simple and Efficient CRISPR Technique for Protein Tagging

por Zeng, Fanning, Beck, Valerie, Schuierer, Sven, Garnier, Isabelle, Manneville, Carole, Agarinis, Claudia, Morelli, Lapo, Quinn, Lisa, Knehr, Judith, Roma, Guglielmo, Bassilana, Frederic, Nash, Mark
Publicado 2020

AS601245, an Anti-Inflammatory JNK Inhibitor, and Clofibrate Have a Synergistic Effect in Inducing Cell Responses and in Affecting the Gene Expression Profile in CaCo-2 Colon Cance...

por Cerbone, Angelo, Toaldo, Cristina, Pizzimenti, Stefania, Pettazzoni, Piergiorgio, Dianzani, Chiara, Minelli, Rosalba, Ciamporcero, Eric, Roma, Guglielmo, Dianzani, Mario Umberto, Canaparo, Roberto, Ferretti, Carlo, Barrera, Giuseppina
Publicado 2012

Rosiglitazone and AS601245 Decrease Cell Adhesion and Migration through Modulation of Specific Gene Expression in Human Colon Cancer Cells

por Cerbone, Angelo, Toaldo, Cristina, Minelli, Rosalba, Ciamporcero, Eric, Pizzimenti, Stefania, Pettazzoni, Piergiorgio, Roma, Guglielmo, Dianzani, Mario Umberto, Ullio, Chiara, Ferretti, Carlo, Dianzani, Chiara, Barrera, Giuseppina
Publicado 2012

Self-organization and symmetry breaking in intestinal organoid development

por Serra, Denise, Mayr, Urs, Boni, Andrea, Lukonin, Ilya, Rempfler, Markus, Meylan, Ludivine Challet, Stadler, Michael B., Strnad, Petr, Papasaikas, Panagiotis, Waldt, Annick, Roma, Guglielmo, Liberali, Prisca
Publicado 2019

Identification of oncogenic driver mutations by genome-wide CRISPR-Cas9 dropout screening

por Kiessling, Michael K., Schuierer, Sven, Stertz, Silke, Beibel, Martin, Bergling, Sebastian, Knehr, Judith, Carbone, Walter, de Vallière, Cheryl, Tchinda, Joelle, Bouwmeester, Tewis, Seuwen, Klaus, Rogler, Gerhard, Roma, Guglielmo
Publicado 2016