Reproducible quantitative proteotype data matrices for systems biology

por Röst, Hannes L., Malmström, Lars, Aebersold, Ruedi
Publicado 2015

Achieving quantitative reproducibility in label-free multisite DIA experiments through multirun alignment

por Gupta, Shubham, Sing, Justin C., Röst, Hannes L.
Publicado 2023

Fast and Efficient XML Data Access for Next-Generation Mass Spectrometry

por Röst, Hannes L., Schmitt, Uwe, Aebersold, Ruedi, Malmström, Lars
Publicado 2015

aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data

por Rosenberger, George, Ludwig, Christina, Röst, Hannes L., Aebersold, Ruedi, Malmström, Lars
Publicado 2014

DIAMetAlyzer allows automated false-discovery rate-controlled analysis for data-independent acquisition in metabolomics

por Alka, Oliver, Shanthamoorthy, Premy, Witting, Michael, Kleigrewe, Karin, Kohlbacher, Oliver, Röst, Hannes L.
Publicado 2022

Statistical elimination of spectral features with large between-run variation enhances quantitative protein-level conclusions in experiments with data-independent spectral acquisit...

por Cheng, Lin-Yang, Liu, Yansheng, Chang, Ching-Yun, Röst, Hannes, Aebersold, Ruedi, Vitek, Olga
Publicado 2015

Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework

por Fahrner, Matthias, Föll, Melanie Christine, Grüning, Björn Andreas, Bernt, Matthias, Röst, Hannes, Schilling, Oliver
Publicado 2022

Computational Expansion of High-Resolution-MS(n) Spectral Libraries

por Lieng, Brandon Y., Quaile, Andrew T., Domingo-Almenara, Xavier, Röst, Hannes L., Montenegro-Burke, J. Rafael
Publicado 2023

Heterogeneity in Early Postpartum Metabolic Profiles Among Women with GDM Who Progressed to Type 2 Diabetes During 10-Year Follow-Up: The SWIFT Study

por Khan, Saifur R, Rost, Hannes, Cox, Brian, Razani, Babak, Alexeeff, Stacey, Wheeler, Michael B., Gunderson, Erica P.
Publicado 2023

Underlying dyslipidemia postpartum in women with a recent GDM pregnancy who develop type 2 diabetes

por Lai, Mi, Al Rijjal, Dana, Röst, Hannes L, Dai, Feihan F, Gunderson, Erica P, Wheeler, Michael B
Publicado 2020

Systematic detection of functional proteoform groups from bottom-up proteomic datasets

por Bludau, Isabell, Frank, Max, Dörig, Christian, Cai, Yujia, Heusel, Moritz, Rosenberger, George, Picotti, Paola, Collins, Ben C., Röst, Hannes, Aebersold, Ruedi
Publicado 2021

Amino acid and lipid metabolism in post-gestational diabetes and progression to type 2 diabetes: A metabolic profiling study

por Lai, Mi, Liu, Ying, Ronnett, Gabriele V., Wu, Anne, Cox, Brian J., Dai, Feihan F., Röst, Hannes L., Gunderson, Erica P., Wheeler, Michael B.
Publicado 2020

Intensive lactation among women with recent gestational diabetes significantly alters the early postpartum circulating lipid profile: the SWIFT study

por Zhang, Ziyi, Lai, Mi, Piro, Anthony L., Alexeeff, Stacey E., Allalou, Amina, Röst, Hannes L., Dai, Feihan F., Wheeler, Michael B., Gunderson, Erica P.
Publicado 2021

TRIC: an automated alignment strategy for reproducible protein quantification in targeted proteomics

por Röst, Hannes L., Liu, Yansheng, D’Agostino, Giuseppe, Zanella, Matteo, Navarro, Pedro, Rosenberger, George, Collins, Ben C., Gillet, Ludovic, Testa, Giuseppe, Malmström, Lars, Aebersold, Ruedi
Publicado 2016

Inference and quantification of peptidoforms in large sample cohorts by SWATH-MS

por Rosenberger, George, Liu, Yansheng, Röst, Hannes L, Ludwig, Christina, Buil, Alfonso, Bensimon, Ariel, Soste, Martin, Spector, Tim D, Dermitzakis, Emmanouil T, Collins, Ben C, Malmström, Lars, Aebersold, Ruedi
Publicado 2017

Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps

por Guo, Tiannan, Kouvonen, Petri, Koh, Ching Chiek, Gillet, Ludovic C, Wolski, Witold E, Röst, Hannes L, Rosenberger, George, Collins, Ben C, Blum, Lorenz C, Gillessen, Silke, Joerger, Markus, Jochum, Wolfram, Aebersold, Ruedi
Publicado 2015

Metabolic Dynamics and Prediction of Gestational Age and Time to Delivery in Pregnant Women

por Liang, Liang, Rasmussen, Marie-Louise Hee, Piening, Brian, Shen, Xiaotao, Chen, Songjie, Röst, Hannes, Snyder, John K., Tibshirani, Robert, Skotte, Line, Lee, Norman CY., Contrepois, Kévin, Feenstra, Bjarke, Zackriah, Hanyah, Snyder, Michael, Melbye, Mads
Publicado 2020

A multi-center study benchmarks software tools for label-free proteome quantification

por Navarro, Pedro, Kuharev, Jörg, Gillet, Ludovic C, Bernhardt, Oliver M., MacLean, Brendan, Röst, Hannes L., Tate, Stephen A., Tsou, Chih-Chiang, Reiter, Lukas, Distler, Ute, Rosenberger, George, Perez-Riverol, Yasset, Nesvizhskii, Alexey I., Aebersold, Ruedi, Tenzer, Stefan
Publicado 2016

High-frequency actionable pathogenic exome variants in an average-risk cohort

por Rego, Shannon, Dagan-Rosenfeld, Orit, Zhou, Wenyu, Sailani, M. Reza, Limcaoco, Patricia, Colbert, Elizabeth, Avina, Monika, Wheeler, Jessica, Craig, Colleen, Salins, Denis, Röst, Hannes L., Dunn, Jessilyn, McLaughlin, Tracey, Steinmetz, Lars M., Bernstein, Jonathan A., Snyder, Michael P.
Publicado 2018

Statistical control of peptide and protein error rates in large-scale targeted DIA analyses

por Rosenberger, George, Bludau, Isabell, Schmitt, Uwe, Heusel, Moritz, Hunter, Christie, Liu, Yansheng, MacCoss, Michael J., MacLean, Brendan X., Nesvizhskii, Alexey I., Pedrioli, Patrick G. A., Reiter, Lukas, Röst, Hannes L., Tate, Stephen, Ting, Ying S., Collins, Ben C., Aebersold, Ruedi
Publicado 2017