Commentary: Demystifying Doppler – revisiting a vital diagnostic tool

por Tehan, Peta, Sommerset, Jill, Rounsley, Richard, Fox, Martin
Publicado 2022

Plantagora: Modeling Whole Genome Sequencing and Assembly of Plant Genomes

por Barthelson, Roger, McFarlin, Adam J., Rounsley, Steven D., Young, Sarah
Publicado 2011

Scaffold filling, contig fusion and comparative gene order inference

por Muñoz, Adriana, Zheng, Chunfang, Zhu, Qian, Albert, Victor A, Rounsley, Steve, Sankoff, David
Publicado 2010

Impact of index hopping and bias towards the reference allele on accuracy of genotype calls from low-coverage sequencing

por Ros-Freixedes, Roger, Battagin, Mara, Johnsson, Martin, Gorjanc, Gregor, Mileham, Alan J., Rounsley, Steve D., Hickey, John M.
Publicado 2018

Variations of five eIF4E genes across cassava accessions exhibiting tolerant and susceptible responses to cassava brown streak disease

por Shi, Shanshan, Zhang, Xiuchun, Mandel, M. Alejandra, Zhang, Peng, Zhang, Yuliang, Ferguson, Morag, Amuge, Teddy, Rounsley, Steve, Liu, Zhixin, Xiong, Zhongguo
Publicado 2017

Sequence variation, evolutionary constraint, and selection at the CD163 gene in pigs

por Johnsson, Martin, Ros-Freixedes, Roger, Gorjanc, Gregor, Campbell, Matt A., Naswa, Sudhir, Kelly, Kimberly, Lightner, Jonathan, Rounsley, Steve, Hickey, John M.
Publicado 2018

Genome Sequence of Ophidiomyces ophiodiicola, an Emerging Fungal Pathogen of Snakes

por Ohkura, Mana, Fitak, Robert R., Wisecaver, Jennifer H., DeBlasio, Dan, Niazi, Faheem, Egholm, Michael, Rounsley, Steven D., Kodira, Chinnappa D., Orbach, Marc J.
Publicado 2017

The Cassava Genome: Current Progress, Future Directions

por Prochnik, Simon, Marri, Pradeep Reddy, Desany, Brian, Rabinowicz, Pablo D., Kodira, Chinnappa, Mohiuddin, Mohammed, Rodriguez, Fausto, Fauquet, Claude, Tohme, Joseph, Harkins, Timothy, Rokhsar, Daniel S., Rounsley, Steve
Publicado 2012

Molecular Characterization of Transgenic Events Using Next Generation Sequencing Approach

por Guttikonda, Satish K., Marri, Pradeep, Mammadov, Jafar, Ye, Liang, Soe, Khaing, Richey, Kimberly, Cruse, James, Zhuang, Meibao, Gao, Zhifang, Evans, Clive, Rounsley, Steve, Kumpatla, Siva P.
Publicado 2016

DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

por Wicker, Thomas, Yu, Yeisoo, Haberer, Georg, Mayer, Klaus F. X., Marri, Pradeep Reddy, Rounsley, Steve, Chen, Mingsheng, Zuccolo, Andrea, Panaud, Olivier, Wing, Rod A., Roffler, Stefan
Publicado 2016

Genome Sequencing Reveals Widespread Virulence Gene Exchange among Human Neisseria Species

por Marri, Pradeep Reddy, Paniscus, Mary, Weyand, Nathan J., Rendón, María A., Calton, Christine M., Hernández, Diana R., Higashi, Dustin L., Sodergren, Erica, Weinstock, George M., Rounsley, Steven D., So, Magdalene
Publicado 2010

QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii

por Nzuki, Inosters, Katari, Manpreet S., Bredeson, Jessen V., Masumba, Esther, Kapinga, Fortunus, Salum, Kasele, Mkamilo, Geoffrey S., Shah, Trushar, Lyons, Jessica B., Rokhsar, Daniel S., Rounsley, Steve, Myburg, Alexander A., Ferguson, Morag E.
Publicado 2017

Candidate genes for field resistance to cassava brown streak disease revealed through the analysis of multiple data sources

por Ferguson, Morag E., Eyles, Rodney P., Garcia-Oliveira, Ana Luísa, Kapinga, Fortunus, Masumba, Esther A., Amuge, Teddy, Bredeson, Jessen V., Rokhsar, Daniel S., Lyons, Jessica B., Shah, Trushar, Rounsley, Steve, Mkamilo, Geoffrey
Publicado 2023

QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert

por Masumba, E. A., Kapinga, F., Mkamilo, G., Salum, K., Kulembeka, H., Rounsley, S., Bredeson, J. V., Lyons, J. B., Rokhsar, D. S., Kanju, E., Katari, M. S., Myburg, A. A., van der Merwe, N. A., Ferguson, M. E.
Publicado 2017

Identification of a Major QTL-Controlling Resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis

por Chen, Andrew, Sun, Jiaman, Martin, Guillaume, Gray, Lesley-Ann, Hřibová, Eva, Christelová, Pavla, Yahiaoui, Nabila, Rounsley, Steve, Lyons, Rebecca, Batley, Jacqueline, Chen, Ning, Hamill, Sharon, Rai, Subash K., Coin, Lachlan, Uwimana, Brigitte, D’Hont, Angelique, Doležel, Jaroslav, Edwards, David, Swennen, Rony, Aitken, Elizabeth A. B.
Publicado 2023

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

por Wang, Muhua, Yu, Yeisoo, Haberer, Georg, Marri, Pradeep Reddy, Fan, Chuanzhu, Goicoechea, Jose Luis, Zuccolo, Andrea, Song, Xiang, Kudrna, Dave, Ammiraju, Jetty S S, Cossu, Rosa Maria, Maldonado, Carlos, Chen, Jinfeng, Lee, Seunghee, Sisneros, Nick, de Baynast, Kristi, Golser, Wolfgang, Wissotski, Marina, Kim, Woojin, Sanchez, Paul, Ndjiondjop, Marie-Noelle, Sanni, Kayode, Long, Manyuan, Carney, Judith, Panaud, Olivier, Wicker, Thomas, Machado, Carlos A, Chen, Mingsheng, Mayer, Klaus F X, Rounsley, Steve, Wing, Rod A
Publicado 2014

A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure

por Zuccolo, Andrea, Bowers, John E, Estill, James C, Xiong, Zhiyong, Luo, Meizhong, Sebastian, Aswathy, Goicoechea, José Luis, Collura, Kristi, Yu, Yeisoo, Jiao, Yuannian, Duarte, Jill, Tang, Haibao, Ayyampalayam, Saravanaraj, Rounsley, Steve, Kudrna, Dave, Paterson, Andrew H, Pires, J Chris, Chanderbali, Andre, Soltis, Douglas E, Chamala, Srikar, Barbazuk, Brad, Soltis, Pamela S, Albert, Victor A, Ma, Hong, Mandoli, Dina, Banks, Jody, Carlson, John E, Tomkins, Jeffrey, dePamphilis, Claude W, Wing, Rod A, Leebens-Mack, Jim
Publicado 2011

The Genome of Nectria haematococca: Contribution of Supernumerary Chromosomes to Gene Expansion

por Coleman, Jeffrey J., Rounsley, Steve D., Rodriguez-Carres, Marianela, Kuo, Alan, Wasmann, Catherine C., Grimwood, Jane, Schmutz, Jeremy, Taga, Masatoki, White, Gerard J., Zhou, Shiguo, Schwartz, David C., Freitag, Michael, Ma, Li-jun, Danchin, Etienne G. J., Henrissat, Bernard, Coutinho, Pedro M., Nelson, David R., Straney, Dave, Napoli, Carolyn A., Barker, Bridget M., Gribskov, Michael, Rep, Martijn, Kroken, Scott, Molnár, István, Rensing, Christopher, Kennell, John C., Zamora, Jorge, Farman, Mark L., Selker, Eric U., Salamov, Asaf, Shapiro, Harris, Pangilinan, Jasmyn, Lindquist, Erika, Lamers, Casey, Grigoriev, Igor V., Geiser, David M., Covert, Sarah F., Temporini, Esteban, VanEtten, Hans D.
Publicado 2009

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

por O'Connell, Richard J, Thon, Michael R, Hacquard, Stéphane, Amyotte, Stefan G, Kleemann, Jochen, Torres, Maria F, Damm, Ulrike, Buiate, Ester A, Epstein, Lynn, Alkan, Noam, Altmüller, Janine, Alvarado-Balderrama, Lucia, Bauser, Christopher A, Becker, Christian, Birren, Bruce W, Chen, Zehua, Choi, Jaeyoung, Crouch, Jo Anne, Duvick, Jonathan P, Farman, Mark A, Gan, Pamela, Heiman, David, Henrissat, Bernard, Howard, Richard J, Kabbage, Mehdi, Koch, Christian, Kracher, Barbara, Kubo, Yasuyuki, Law, Audrey D, Lebrun, Marc-Henri, Lee, Yong-Hwan, Miyara, Itay, Moore, Neil, Neumann, Ulla, Nordström, Karl, Panaccione, Daniel G, Panstruga, Ralph, Place, Michael, Proctor, Robert H, Prusky, Dov, Rech, Gabriel, Reinhardt, Richard, Rollins, Jeffrey A, Rounsley, Steve, Schardl, Christopher L, Schwartz, David C, Shenoy, Narmada, Shirasu, Ken, Sikhakolli, Usha R, Stüber, Kurt, Sukno, Serenella A, Sweigard, James A, Takano, Yoshitaka, Takahara, Hiroyuki, Trail, Frances, van der Does, H Charlotte, Voll, Lars M, Will, Isa, Young, Sarah, Zeng, Qiandong, Zhang, Jingze, Zhou, Shiguo, Dickman, Martin B, Schulze-Lefert, Paul, Ver Loren van Themaat, Emiel, Ma, Li-Jun, Vaillancourt, Lisa J
Publicado 2012