Whole-genome Sequencing Provides Data for Stratifying Infection Prevention and Control Management of Nosocomial Influenza A

por Roy, Sunando, Hartley, John, Dunn, Helen, Williams, Rachel, Williams, Charlotte A, Breuer, Judith
Publicado 2019

Multivariate Statistical Analyses Demonstrate Unique Host Immune Responses to Single and Dual Lentiviral Infection

por Roy, Sunando, Lavine, Jennie, Chiaromonte, Francesca, Terwee, Julie, VandeWoude, Sue, Bjornstad, Ottar, Poss, Mary
Publicado 2009

The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission

por Ruis, Christopher, Roy, Sunando, Brown, Julianne R., Allen, David J., Goldstein, Richard A., Breuer, Judith
Publicado 2017

On the effective depth of viral sequence data

por Illingworth, Christopher J R, Roy, Sunando, Beale, Mathew A, Tutill, Helena, Williams, Rachel, Breuer, Judith
Publicado 2017

Full-Genome Sequence of the First G8P[14] Rotavirus Strain Detected in the United States

por Mijatovic-Rustempasic, Slavica, Roy, Sunando, Sturgeon, Michele, Rungsrisuriyachai, Kunchala, Reisdorf, Erik, Cortese, Margaret M., Bowen, Michael D.
Publicado 2015

Haplotype assignment of longitudinal viral deep sequencing data using covariation of variant frequencies

por Venturini, Cristina, Pang, Juanita, Tamuri, Asif U, Roy, Sunando, Atkinson, Claire, Griffiths, Paul, Breuer, Judith, Goldstein, Richard A
Publicado 2022

Full Genome Sequence of a Reassortant Human G9P[4] Rotavirus Strain

por Lewis, Jamie, Roy, Sunando, Esona, Mathew D., Mijatovic-Rustempasic, Slavica, Hardy, Christine, Wang, Yuhuan, Cortese, Margaret, Bowen, Michael D.
Publicado 2014

Norovirus Transmission Dynamics in a Pediatric Hospital Using Full Genome Sequences

por Brown, Julianne R, Roy, Sunando, Shah, Divya, Williams, Charlotte A, Williams, Rachel, Dunn, Helen, Hartley, John, Harris, Kathryn, Breuer, Judy
Publicado 2019

Cluster of Symptomatic Graft-to-Host Transmission of Herpes Simplex Virus Type 1 in an Endothelial Keratoplasty Setting

por Guerra-Assunção, José Afonso, van Kampen, Jeroen J.A., Roy, Sunando, Remeijer, Lies, Breuer, Judy, Verjans, Georges M.G. M.
Publicado 2021

Full-Genome Sequence of a Rare Human G3P[9] Rotavirus Strain

por Mijatovic-Rustempasic, Slavica, Roy, Sunando, Sturgeon, Michele, Rungsrisuriyachai, Kunchala, Esona, Mathew D., DeGroat, Dona, Qin, Xuan, Cortese, Margaret M., Bowen, Michael D.
Publicado 2014

Characterisation of a rare, reassortant human G10P[14] rotavirus strain detected in Honduras

por Quaye, Osbourne, Roy, Sunando, Rungsrisuriyachai, Kunchala, Esona, Mathew D, Xu, Ziqian, Tam, Ka Ian, Banegas, Dina J Castro, Rey-Benito, Gloria, Bowen, Michael D
Publicado 2018

Detection of Novel Rotavirus Strain by Vaccine Postlicensure Surveillance

por Weinberg, Geoffrey A., Teel, Elizabeth N., Mijatovic-Rustempasic, Slavica, Payne, Daniel C., Roy, Sunando, Foytich, Kimberly, Parashar, Umesh D., Gentsch, Jon R., Bowen, Michael D.
Publicado 2013

A large population sample of African HIV genomes from the 1980s reveals a reduction in subtype D over time associated with propensity for CXCR4 tropism

por Grant, Heather E., Roy, Sunando, Williams, Rachel, Tutill, Helena, Ferns, Bridget, Cane, Patricia A., Carswell, J. Wilson, Ssemwanga, Deogratius, Kaleebu, Pontiano, Breuer, Judith, Leigh Brown, Andrew J.
Publicado 2022

Within-host diversity improves phylogenetic and transmission reconstruction of SARS-CoV-2 outbreaks

por Torres Ortiz, Arturo, Kendall, Michelle, Storey, Nathaniel, Hatcher, James, Dunn, Helen, Roy, Sunando, Williams, Rachel, Williams, Charlotte, Goldstein, Richard A, Didelot, Xavier, Harris, Kathryn, Breuer, Judith, Grandjean, Louis
Publicado 2023

Within-host diversity improves phylogenetic and transmission reconstruction of SARS-CoV-2 outbreaks

por Ortiz, Arturo Torres, Kendall, Michelle, Storey, Nathaniel, Hatcher, James, Dunn, Helen, Roy, Sunando, Williams, Rachel, Williams, Charlotte, Goldstein, Richard A., Didelot, Xavier, Harris, Kathryn, Breuer, Judith, Grandjean, Louis
Publicado 2022

G2P[4]-RotaTeq Reassortant Rotavirus in Vaccinated Child, United States

por Roy, Sunando, Rungsrisuriyachai, Kunchala, Esona, Mathew D., Boom, Julie A., Sahni, Leila C., Rench, Marcia A., Baker, Carol J., Wikswo, Mary E., Payne, Daniel C., Parashar, Umesh D., Bowen, Michael D.
Publicado 2015

Human cytomegalovirus haplotype reconstruction reveals high diversity due to superinfection and evidence of within-host recombination

por Cudini, Juliana, Roy, Sunando, Houldcroft, Charlotte J., Bryant, Josephine M., Depledge, Daniel P., Tutill, Helena, Veys, Paul, Williams, Rachel, Worth, Austen J. J., Tamuri, Asif U., Goldstein, Richard A., Breuer, Judith
Publicado 2019

Deep sequencing of HIV-1 reveals extensive subtype variation and drug resistance after failure of first-line antiretroviral regimens in Nigeria

por El Bouzidi, Kate, Datir, Rawlings P., Kwaghe, Vivian, Roy, Sunando, Frampton, Dan, Breuer, Judith, Ogbanufe, Obinna, Murtala-Ibrahim, Fati, Charurat, Man, Dakum, Patrick, Sabin, Caroline A., Ndembi, Nicaise, Gupta, Ravindra K.
Publicado 2021

Post-Vaccination Coronavirus Disease 2019: A Case-Control Study and Genomic Analysis of 119 Breakthrough Infections in Partially Vaccinated Individuals( )

por Baltas, Ioannis, Boshier, Florencia A T, Williams, Charlotte A, Bayzid, Nadua, Cotic, Marius, Afonso Guerra-Assunção, José, Irish-Tavares, Dianne, Haque, Tanzina, Hart, Jennifer, Roy, Sunando, Williams, Rachel, Breuer, Judith, Mahungu, Tabitha W
Publicado 2021

Mixed cytomegalovirus genotypes in HIV-positive mothers show compartmentalization and distinct patterns of transmission to infants

por Pang, Juanita, Slyker, Jennifer A, Roy, Sunando, Bryant, Josephine, Atkinson, Claire, Cudini, Juliana, Farquhar, Carey, Griffiths, Paul, Kiarie, James, Morfopoulou, Sofia, Roxby, Alison C, Tutil, Helena, Williams, Rachel, Gantt, Soren, Goldstein, Richard A, Breuer, Judith
Publicado 2020