Dissecting High-Dimensional Phenotypes with Bayesian Sparse Factor Analysis of Genetic Covariance Matrices

por Runcie, Daniel E., Mukherjee, Sayan
Publicado 2013

Fast and flexible linear mixed models for genome-wide genetics

por Runcie, Daniel E., Crawford, Lorin
Publicado 2019

MegaLMM: Mega-scale linear mixed models for genomic predictions with thousands of traits

por Runcie, Daniel E., Qu, Jiayi, Cheng, Hao, Crawford, Lorin
Publicado 2021

Multi-Trait Genomic Prediction Improves Accuracy of Selection among Doubled Haploid Lines in Maize

por Hu, Haixiao, Meng, Yujie, Liu, Wenxin, Chen, Shaojiang, Runcie, Daniel E.
Publicado 2022

Implications of genetic heterogeneity for plant translocation during ecological restoration

por Crow, Taylor M., Buerkle, C. Alex, Runcie, Daniel E., Hufford, Kristina M.
Publicado 2021

Genomic Characterization of the Evolutionary Potential of the Sea Urchin Strongylocentrotus droebachiensis Facing Ocean Acidification

por Runcie, Daniel E., Dorey, Narimane, Garfield, David A., Stumpp, Meike, Dupont, Sam, Wray, Gregory A.
Publicado 2016

The Impact of Gene Expression Variation on the Robustness and Evolvability of a Developmental Gene Regulatory Network

por Garfield, David A., Runcie, Daniel E., Babbitt, Courtney C., Haygood, Ralph, Nielsen, William J., Wray, Gregory A.
Publicado 2013

Functional variants of DOG1 control seed chilling responses and variation in seasonal life-history strategies in Arabidopsis thaliana

por Martínez-Berdeja, Alejandra, Stitzer, Michelle C., Taylor, Mark A., Okada, Miki, Ezcurra, Exequiel, Runcie, Daniel E., Schmitt, Johanna
Publicado 2020

Translational regulation contributes to the elevated CO(2) response in two Solanum species

por Gray, Sharon B., Rodriguez‐Medina, Joel, Rusoff, Samuel, Toal, Ted W., Kajala, Kaisa, Runcie, Daniel E., Brady, Siobhan M.
Publicado 2020

Modeling allelic diversity of multiparent mapping populations affects detection of quantitative trait loci

por Odell, Sarah G, Hudson, Asher I, Praud, Sébastien, Dubreuil, Pierre, Tixier, Marie-Hélène, Ross-Ibarra, Jeffrey, Runcie, Daniel E
Publicado 2022

Analysis of genotype-by-environment interactions in a maize mapping population

por Hudson, Asher I, Odell, Sarah G, Dubreuil, Pierre, Tixier, Marie-Helene, Praud, Sebastien, Runcie, Daniel E, Ross-Ibarra, Jeffrey
Publicado 2022

Maintenance of quantitative genetic variance in complex, multitrait phenotypes: the contribution of rare, large effect variants in 2 Drosophila species

por Hine, Emma, Runcie, Daniel E, Allen, Scott L, Wang, Yiguan, Chenoweth, Stephen F, Blows, Mark W, McGuigan, Katrina
Publicado 2022

Large-effect flowering time mutations reveal conditionally adaptive paths through fitness landscapes in Arabidopsis thaliana

por Taylor, Mark A., Wilczek, Amity M., Roe, Judith L., Welch, Stephen M., Runcie, Daniel E., Cooper, Martha D., Schmitt, Johanna
Publicado 2019

Multi-trait genomic-enabled prediction enhances accuracy in multi-year wheat breeding trials

por Montesinos-López, Abelardo, Runcie, Daniel E, Ibba, Maria Itria, Pérez-Rodríguez, Paulino, Montesinos-López, Osval A, Crespo, Leonardo A, Bentley, Alison R, Crossa, José
Publicado 2021

Social network analysis of the genealogy of strawberry: retracing the wild roots of heirloom and modern cultivars

por Pincot, Dominique D. A, Ledda, Mirko, Feldmann, Mitchell J, Hardigan, Michael A, Poorten, Thomas J, Runcie, Daniel E, Heffelfinger, Christopher, Dellaporta, Stephen L, Cole, Glenn S, Knapp, Steven J
Publicado 2021

Corrigendum to: “Social network analysis of the genealogy of strawberry: retracing the wild roots of heirloom and modern cultivars”

por Pincot, Dominique D A, Ledda, Mirko, Feldmann, Mitchell J, Hardigan, Michael A, Poorten, Thomas J, Runcie, Daniel E, Heffelfinger, Christopher, Dellaporta, Stephen L, Cole, Glenn S, Knapp, Steven J
Publicado 2021

Allele-specific Expression Reveals Multiple Paths to Highland Adaptation in Maize

por Hu, Haixiao, Crow, Taylor, Nojoomi, Saghi, Schulz, Aimee J, Estévez-Palmas, Juan M, Hufford, Matthew B, Flint-Garcia, Sherry, Sawers, Ruairidh, Rellán-Álvarez, Rubén, Ross-Ibarra, Jeffrey, Runcie, Daniel E
Publicado 2022

Demonstration of local adaptation in maize landraces by reciprocal transplantation

por Janzen, Garrett M., Aguilar‐Rangel, María Rocío, Cíntora‐Martínez, Carolina, Blöcher‐Juárez, Karla Azucena, González‐Segovia, Eric, Studer, Anthony J., Runcie, Daniel E., Flint‐Garcia, Sherry A., Rellán‐Álvarez, Rubén, Sawers, Ruairidh J. H., Hufford, Matthew B.
Publicado 2022

Multi-omics prediction of oat agronomic and seed nutritional traits across environments and in distantly related populations

por Hu, Haixiao, Campbell, Malachy T., Yeats, Trevor H., Zheng, Xuying, Runcie, Daniel E., Covarrubias-Pazaran, Giovanny, Broeckling, Corey, Yao, Linxing, Caffe-Treml, Melanie, Gutiérrez, Lucía, Smith, Kevin P., Tanaka, James, Hoekenga, Owen A., Sorrells, Mark E., Gore, Michael A., Jannink, Jean-Luc
Publicado 2021