A manually curated ChIP-seq benchmark demonstrates room for improvement in current peak-finder programs

por Rye, Morten Beck, Sætrom, Pål, Drabløs, Finn
Publicado 2011

DNA methylation data by sequencing: experimental approaches and recommendations for tools and pipelines for data analysis

por Rauluseviciute, Ieva, Drabløs, Finn, Rye, Morten Beck
Publicado 2019

DNA hypermethylation associated with upregulated gene expression in prostate cancer demonstrates the diversity of epigenetic regulation

por Rauluseviciute, Ieva, Drabløs, Finn, Rye, Morten Beck
Publicado 2020

A ChIP-Seq Benchmark Shows That Sequence Conservation Mainly Improves Detection of Strong Transcription Factor Binding Sites

por Håndstad, Tony, Rye, Morten Beck, Drabløs, Finn, Sætrom, Pål
Publicado 2011

The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding

por Kornacker, Karl, Rye, Morten Beck, Håndstad, Tony, Drabløs, Finn
Publicado 2012

FunHoP analysis reveals upregulation of mitochondrial genes in prostate cancer

por Rise, Kjersti, Tessem, May-Britt, Drabløs, Finn, Rye, Morten Beck
Publicado 2022

Gene signatures ESC, MYC and ERG-fusion are early markers of a potentially dangerous subtype of prostate cancer

por Rye, Morten Beck, Bertilsson, Helena, Drabløs, Finn, Angelsen, Anders, Bathen, Tone F, Tessem, May-Britt
Publicado 2014

A Balanced Tissue Composition Reveals New Metabolic and Gene Expression Markers in Prostate Cancer

por Tessem, May-Britt, Bertilsson, Helena, Angelsen, Anders, Bathen, Tone F., Drabløs, Finn, Rye, Morten Beck
Publicado 2016

Cholesterol synthesis pathway genes in prostate cancer are transcriptionally downregulated when tissue confounding is minimized

por Rye, Morten Beck, Bertilsson, Helena, Andersen, Maria K., Rise, Kjersti, Bathen, Tone F., Drabløs, Finn, Tessem, May-Britt
Publicado 2018

The genes controlling normal function of citrate and spermine secretion are lost in aggressive prostate cancer and prostate model systems

por Rye, Morten Beck, Krossa, Sebastian, Hall, Martina, van Mourik, Casper, Bathen, Tone F., Drabløs, Finn, Tessem, May-Britt, Bertilsson, Helena
Publicado 2022

Phosphatase of regenerating liver 3 (PRL-3) is overexpressed in human prostate cancer tissue and promotes growth and migration

por Vandsemb, Esten N., Bertilsson, Helena, Abdollahi, Pegah, Størkersen, Øystein, Våtsveen, Thea Kristin, Rye, Morten Beck, Rø, Torstein Baade, Børset, Magne, Slørdahl, Tobias S.
Publicado 2016

Glutamine to proline conversion is associated with response to glutaminase inhibition in breast cancer

por Grinde, Maria T., Hilmarsdottir, Bylgja, Tunset, Hanna Maja, Henriksen, Ida Marie, Kim, Jana, Haugen, Mads H., Rye, Morten Beck, Mælandsmo, Gunhild M., Moestue, Siver A.
Publicado 2019

Presence of TMPRSS2-ERG is associated with alterations of the metabolic profile in human prostate cancer

por Hansen, Ailin Falkmo, Sandsmark, Elise, Rye, Morten Beck, Wright, Alan J., Bertilsson, Helena, Richardsen, Elin, Viset, Trond, Bofin, Anna M., Angelsen, Anders, Selnæs, Kirsten M., Bathen, Tone Frost, Tessem, May-Britt
Publicado 2016