Towards a post-pandemic future for global pathogen genome sequencing

por Ladner, Jason T., Sahl, Jason W.
Publicado 2023

The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes

por Sahl, Jason W., Caporaso, J. Gregory, Rasko, David A., Keim, Paul
Publicado 2014

Redefining the differences in gene content between Yersinia pestis and Yersinia pseudotuberculosis using large-scale comparative genomics

por Califf, Katy J., Keim, Paul S., Wagner, David M., Sahl, Jason W.
Publicado 2015

Variant site strain typer (VaST): efficient strain typing using a minimal number of variant genomic sites

por Furstenau, Tara N., Cocking, Jill H., Sahl, Jason W., Fofanov, Viacheslav Y.
Publicado 2018

Draft Genome Sequence of a Streptococcus suis Isolate from a Case of Cattle Meningitis

por Okwumabua, Ogi, Williamson, Charles H. D., Pearson, Talima R., Sahl, Jason W.
Publicado 2020

High Frequency, Spontaneous motA Mutations in Campylobacter jejuni Strain 81-176

por Mohawk, Krystle L., Poly, Frédéric, Sahl, Jason W., Rasko, David A., Guerry, Patricia
Publicado 2014

Diversity, Virulence, and Antimicrobial Resistance in Isolates From the Newly Emerging Klebsiella pneumoniae ST101 Lineage

por Roe, Chandler C., Vazquez, Adam J., Esposito, Eliana Pia, Zarrilli, Raffaele, Sahl, Jason W.
Publicado 2019

CRISPR-cas Subtype I-Fb in Acinetobacter baumannii: Evolution and Utilization for Strain Subtyping

por Karah, Nabil, Samuelsen, Ørjan, Zarrilli, Raffaele, Sahl, Jason W., Wai, Sun Nyunt, Uhlin, Bernt Eric
Publicado 2015

Draft Genome Sequences of Three O157 Enteropathogenic Escherichia coli Isolates

por Hazen, Tracy H., Sahl, Jason W., Fraser, Claire M., Donnenberg, Michael S., Scheutz, Flemming, Rasko, David A.
Publicado 2013

Phylogenetically typing bacterial strains from partial SNP genotypes observed from direct sequencing of clinical specimen metagenomic data

por Sahl, Jason W., Schupp, James M., Rasko, David A., Colman, Rebecca E., Foster, Jeffrey T., Keim, Paul
Publicado 2015

Comparative Genomics and stx Phage Characterization of LEE-Negative Shiga Toxin-Producing Escherichia coli

por Steyert, Susan R., Sahl, Jason W., Fraser, Claire M., Teel, Louise D., Scheutz, Flemming, Rasko, David A.
Publicado 2012

Phylogenetic and genomic diversity in isolates from the globally distributed Acinetobacter baumannii ST25 lineage

por Sahl, Jason W., Del Franco, Mariateresa, Pournaras, Spyros, Colman, Rebecca E., Karah, Nabil, Dijkshoorn, Lenie, Zarrilli, Raffaele
Publicado 2015

Complete Genome Sequence of Peptacetobacter (Clostridium) hiranonis Strain DGF055142, Isolated from Dog Feces from Flagstaff, Arizona, USA, 2019

por Stone, Nathan E., Nunnally, Amalee E., Roe, Chandler C., Hornstra, Heidie M., Wagner, David M., Sahl, Jason W.
Publicado 2021

Draft Genome Sequences of Two Bulgarian Bacillus anthracis Strains

por Birdsell, Dawn N., Antwerpen, Markus, Keim, Paul, Hanczaruk, Matthias, Foster, Jeffrey T., Sahl, Jason W., Wagner, David M., Grass, Gregor
Publicado 2013

Complete mitochondrial genome of Onchocerca lupi (Nematoda, Onchocercidae)

por Roe, Chandler C., Urbanz, Jennifer, Andrews, Lela, Verocai, Guilherme G., Engelthaler, David M., Hepp, Crystal M., Sahl, Jason W.
Publicado 2021

Evolution of a Pathogen: A Comparative Genomics Analysis Identifies a Genetic Pathway to Pathogenesis in Acinetobacter

por Sahl, Jason W., Gillece, John D., Schupp, James M., Waddell, Victor G., Driebe, Elizabeth M., Engelthaler, David M., Keim, Paul
Publicado 2013

LupiQuant: A real-time PCR based assay for determining host-to-parasite DNA ratios of Onchocerca lupi and host Canis lupus from onchocercosis samples

por Roe, Chandler C., Urbanz, Jennifer, Auten, Candace, Verocai, Guilherme G., Upshaw-Bia, Kelly, Holiday, Olivia, Hepp, Crystal, Sahl, Jason W.
Publicado 2022

Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity

por Sahl, Jason W, Johnson, J Kristie, Harris, Anthony D, Phillippy, Adam M, Hsiao, William W, Thom, Kerri A, Rasko, David A
Publicado 2011

Genome Sequence of Burkholderia pseudomallei NCTC 13392

por Sahl, Jason W., Stone, Joshua K., Gelhaus, H. Carl, Warren, Richard L., Cruttwell, Caroline J., Funnell, Simon G., Keim, Paul, Tuanyok, Apichai
Publicado 2013

Proteomic analysis of four Clostridium botulinum strains identifies proteins that link biological responses to proteomic signatures

por Deatherage Kaiser, Brooke L., Hill, Karen K., Smith, Theresa J., Williamson, Charles H. D., Keim, Paul, Sahl, Jason W., Wahl, Karen L.
Publicado 2018