Highly Efficient Computation of the Basal k(on) using Direct Simulation of Protein–Protein Association with Flexible Molecular Models

por Saglam, Ali S., Chong, Lillian T.
Publicado 2015

Protein–protein binding pathways and calculations of rate constants using fully-continuous, explicit-solvent simulations

por Saglam, Ali S., Chong, Lillian T.
Publicado 2018

Combination treatment optimization using a pan-cancer pathway model

por Schmucker, Robin, Farina, Gabriele, Faeder, James, Fröhlich, Fabian, Saglam, Ali Sinan, Sandholm, Tuomas
Publicado 2021

Can Simple Tests Prior to Endoscopy Predict the OLGA Stage of Gastritis?

por Bulbuloglu, Ertan, Dagmura, Hasan, Daldal, Emin, Deresoy, Alev, Bakir, Huseyin, Ozsoy, Ugur, Saglam, Ali Ihsan, Demir, Osman
Publicado 2020

BioSimulators: a central registry of simulation engines and services for recommending specific tools

por Shaikh, Bilal, Smith, Lucian P, Vasilescu, Dan, Marupilla, Gnaneswara, Wilson, Michael, Agmon, Eran, Agnew, Henry, Andrews, Steven S, Anwar, Azraf, Beber, Moritz E, Bergmann, Frank T, Brooks, David, Brusch, Lutz, Calzone, Laurence, Choi, Kiri, Cooper, Joshua, Detloff, John, Drawert, Brian, Dumontier, Michel, Ermentrout, G Bard, Faeder, James R, Freiburger, Andrew P, Fröhlich, Fabian, Funahashi, Akira, Garny, Alan, Gennari, John H, Gleeson, Padraig, Goelzer, Anne, Haiman, Zachary, Hasenauer, Jan, Hellerstein, Joseph L, Hermjakob, Henning, Hoops, Stefan, Ison, Jon C, Jahn, Diego, Jakubowski, Henry V, Jordan, Ryann, Kalaš, Matúš, König, Matthias, Liebermeister, Wolfram, Sheriff, Rahuman S Malik, Mandal, Synchon, McDougal, Robert, Medley, J Kyle, Mendes, Pedro, Müller, Robert, Myers, Chris J, Naldi, Aurelien, Nguyen, Tung V N, Nickerson, David P, Olivier, Brett G, Patoliya, Drashti, Paulevé, Loïc, Petzold, Linda R, Priya, Ankita, Rampadarath, Anand K, Rohwer, Johann M, Saglam, Ali S, Singh, Dilawar, Sinha, Ankur, Snoep, Jacky, Sorby, Hugh, Spangler, Ryan, Starruß, Jörn, Thomas, Payton J, van Niekerk, David, Weindl, Daniel, Zhang, Fengkai, Zhukova, Anna, Goldberg, Arthur P, Schaff, James C, Blinov, Michael L, Sauro, Herbert M, Moraru, Ion I, Karr, Jonathan R
Publicado 2022