Comparative Genomic and Metagenomic Investigations of the Corynebacterium tuberculostearicum Species Complex Reveals Potential Mechanisms Underlying Associations To Skin Health and...

por Salamzade, Rauf, Swaney, Mary Hannah, Kalan, Lindsay R.
Publicado 2022

vRhyme enables binning of viral genomes from metagenomes

por Kieft, Kristopher, Adams, Alyssa, Salamzade, Rauf, Kalan, Lindsay, Anantharaman, Karthik
Publicado 2022

Genomic epidemiology and antibiotic susceptibility profiling of uropathogenic Escherichia coli among children in the United States

por Salamzade, Rauf, McElheny, Christi L., Manson, Abigail L., Earl, Ashlee M., Shaikh, Nader, Doi, Yohei
Publicado 2023

Genes Contributing to the Unique Biology and Intrinsic Antibiotic Resistance of Enterococcus faecalis

por Gilmore, Michael S., Salamzade, Rauf, Selleck, Elizabeth, Bryan, Noelle, Mello, Suelen S., Manson, Abigail L., Earl, Ashlee M.
Publicado 2020

Key Transitions in the Evolution of Rapid and Slow Growing Mycobacteria Identified by Comparative Genomics

por Bachmann, Nathan L., Salamzade, Rauf, Manson, Abigail L., Whittington, Richard, Sintchenko, Vitali, Earl, Ashlee M., Marais, Ben J.
Publicado 2020

zol & fai: large-scale targeted detection and evolutionary investigation of gene clusters

por Salamzade, Rauf, Tran, Patricia, Martin, Cody, Manson, Abigail L., Gilmore, Michael S., Earl, Ashlee M., Anantharaman, Karthik, Kalan, Lindsay R.
Publicado 2023

Genomic evidence of geographically widespread effect of gene flow from polar bears into brown bears

por Cahill, James A, Stirling, Ian, Kistler, Logan, Salamzade, Rauf, Ersmark, Erik, Fulton, Tara L, Stiller, Mathias, Green, Richard E, Shapiro, Beth
Publicado 2015

Strain-specific quantification of root colonization by plant growth promoting rhizobacteria Bacillus firmus I-1582 and Bacillus amyloliquefaciens QST713 in non-sterile soil and fie...

por Mendis, Hajeewaka C., Thomas, Varghese P., Schwientek, Patrick, Salamzade, Rauf, Chien, Jung-Ting, Waidyarathne, Pramuditha, Kloepper, Joseph, De La Fuente, Leonardo
Publicado 2018

Evolutionary investigations of the biosynthetic diversity in the skin microbiome using lsaBGC

por Salamzade, Rauf, Cheong, J.Z. Alex, Sandstrom, Shelby, Swaney, Mary Hannah, Stubbendieck, Reed M., Starr, Nicole Lane, Currie, Cameron R., Singh, Anne Marie, Kalan, Lindsay R.
Publicado 2023

Genomic Evidence for Island Population Conversion Resolves Conflicting Theories of Polar Bear Evolution

por Cahill, James A., Green, Richard E., Fulton, Tara L., Stiller, Mathias, Jay, Flora, Ovsyanikov, Nikita, Salamzade, Rauf, St. John, John, Stirling, Ian, Slatkin, Montgomery, Shapiro, Beth
Publicado 2013

Global diversity of enterococci and description of 18 novel species

por Schwartzman, Julia A., Lebreton, Francois, Salamzade, Rauf, Martin, Melissa J., Schaufler, Katharina, Urhan, Aysun, Abeel, Thomas, Camargo, Ilana L.B.C, Sgardioli, Bruna F., Prichula, Janira, Frazzon, Ana Paula Guedes, Van Tyne, Daria, Treinish, Gregg, Innis, Charles J., Wagenaar, Jaap A., Whipple, Ryan M., Manson, Abigail L., Earl, Ashlee M., Gilmore, Michael S.
Publicado 2023

Inter-species geographic signatures for tracing horizontal gene transfer and long-term persistence of carbapenem resistance

por Salamzade, Rauf, Manson, Abigail L., Walker, Bruce J., Brennan-Krohn, Thea, Worby, Colin J., Ma, Peijun, He, Lorrie L., Shea, Terrance P., Qu, James, Chapman, Sinéad B., Howe, Whitney, Young, Sarah K., Wurster, Jenna I., Delaney, Mary L., Kanjilal, Sanjat, Onderdonk, Andrew B., Bittencourt, Cassiana E., Gussin, Gabrielle M., Kim, Diane, Peterson, Ellena M., Ferraro, Mary Jane, Hooper, David C., Shenoy, Erica S., Cuomo, Christina A., Cosimi, Lisa A., Huang, Susan S., Kirby, James E., Pierce, Virginia M., Bhattacharyya, Roby P., Earl, Ashlee M.
Publicado 2022