INTERFEROME: the database of interferon regulated genes

por Samarajiwa, Shamith A., Forster, Sam, Auchettl, Katie, Hertzog, Paul J.
Publicado 2009

Exploring the role of stromal osmoregulation in cancer and disease using executable modelling

por Shorthouse, David, Riedel, Angela, Kerr, Emma, Pedro, Luisa, Bihary, Dóra, Samarajiwa, Shamith, Martins, Carla P., Shields, Jacqueline, Hall, Benjamin A.
Publicado 2018

A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data

por Barbosa-Morais, Nuno L., Dunning, Mark J., Samarajiwa, Shamith A., Darot, Jeremy F. J., Ritchie, Matthew E., Lynch, Andy G., Tavaré, Simon
Publicado 2010

Lung tumors with distinct p53 mutations respond similarly to p53 targeted therapy but exhibit genotype-specific statin sensitivity

por Turrell, Frances K., Kerr, Emma M., Gao, Meiling, Thorpe, Hannah, Doherty, Gary J., Cridge, Jake, Shorthouse, David, Speed, Alyson, Samarajiwa, Shamith, Hall, Benjamin A., Griffiths, Meryl, Martins, Carla P.
Publicado 2017

A KLF6-driven transcriptional network links lipid homeostasis and tumour growth in renal carcinoma

por Syafruddin, Saiful E., Rodrigues, Paulo, Vojtasova, Erika, Patel, Saroor A., Zaini, M. Nazhif, Burge, Johanna, Warren, Anne Y., Stewart, Grant D., Eisen, Tim, Bihary, Dóra, Samarajiwa, Shamith A., Vanharanta, Sakari
Publicado 2019

NOTCH-mediated non-cell autonomous regulation of chromatin structure during senescence

por Parry, Aled J., Hoare, Matthew, Bihary, Dóra, Hänsel-Hertsch, Robert, Smith, Stephen, Tomimatsu, Kosuke, Mannion, Elizabeth, Smith, Amy, D’Santos, Paula, Russell, I. Alasdair, Balasubramanian, Shankar, Kimura, Hiroshi, Samarajiwa, Shamith A., Narita, Masashi
Publicado 2018

Transcription-dependent cohesin repositioning rewires chromatin loops in cellular senescence

por Olan, Ioana, Parry, Aled J., Schoenfelder, Stefan, Narita, Masako, Ito, Yoko, Chan, Adelyne S. L., Slater, Guy St.C., Bihary, Dóra, Bando, Masashige, Shirahige, Katsuhiko, Kimura, Hiroshi, Samarajiwa, Shamith A., Fraser, Peter, Narita, Masashi
Publicado 2020

Neuron type‐specific increase in lamin B1 contributes to nuclear dysfunction in Huntington’s disease

por Alcalá‐Vida, Rafael, Garcia‐Forn, Marta, Castany‐Pladevall, Carla, Creus‐Muncunill, Jordi, Ito, Yoko, Blanco, Enrique, Golbano, Arantxa, Crespí‐Vázquez, Kilian, Parry, Aled, Slater, Guy, Samarajiwa, Shamith, Peiró, Sandra, Di Croce, Luciano, Narita, Masashi, Pérez‐Navarro, Esther
Publicado 2020

Phenotype Specific Analyses Reveal Distinct Regulatory Mechanism for Chronically Activated p53

por Kirschner, Kristina, Samarajiwa, Shamith A., Cairns, Jonathan M., Menon, Suraj, Pérez-Mancera, Pedro A., Tomimatsu, Kosuke, Bermejo-Rodriguez, Camino, Ito, Yoko, Chandra, Tamir, Narita, Masako, Lyons, Scott K., Lynch, Andy G., Kimura, Hiroshi, Ohbayashi, Tetsuya, Tavaré, Simon, Narita, Masashi
Publicado 2015

Accurate detection of benign and malignant renal tumor subtypes with MethylBoostER: An epigenetic marker–driven learning framework

por Rossi, Sabrina H., Newsham, Izzy, Pita, Sara, Brennan, Kevin, Park, Gahee, Smith, Christopher G., Lach, Radoslaw P., Mitchell, Thomas, Huang, Junfan, Babbage, Anne, Warren, Anne Y., Leppert, John T., Stewart, Grant D., Gevaert, Olivier, Massie, Charles E., Samarajiwa, Shamith A.
Publicado 2022

ZNF703 is a common Luminal B breast cancer oncogene that differentially regulates luminal and basal progenitors in human mammary epithelium

por Holland, Daniel G, Burleigh, Angela, Git, Anna, Goldgraben, Mae A, Perez-Mancera, Pedro A, Chin, Suet-Feung, Hurtado, Antonio, Bruna, Alejandra, Ali, H Raza, Greenwood, Wendy, Dunning, Mark J, Samarajiwa, Shamith, Menon, Suraj, Rueda, Oscar M, Lynch, Andy G, McKinney, Steven, Ellis, Ian O, Eaves, Connie J, Carroll, Jason S, Curtis, Christina, Aparicio, Samuel, Caldas, Carlos
Publicado 2011

Genome co-amplification upregulates a mitotic gene network activity that predicts outcome and response to mitotic protein inhibitors in breast cancer

por Hu, Zhi, Mao, Jian-Hua, Curtis, Christina, Huang, Ge, Gu, Shenda, Heiser, Laura, Lenburg, Marc E., Korkola, James E., Bayani, Nora, Samarajiwa, Shamith, Seoane, Jose A., A. Dane, Mark, Esch, Amanda, Feiler, Heidi S., Wang, Nicholas J., Hardwicke, Mary Ann, Laquerre, Sylvie, Jackson, Jeff, W. Wood, Kenneth, Weber, Barbara, Spellman, Paul T., Aparicio, Samuel, Wooster, Richard, Caldas, Carlos, Gray, Joe W.
Publicado 2016

Erratum to: Genome co-amplification upregulates a mitotic gene network activity that predicts outcome and response to mitotic protein inhibitors in breast cancer

por Hu, Zhi, Mao, Jian-Hua, Curtis, Christina, Huang, Ge, Gu, Shenda, Heiser, Laura, Lenburg, Marc E., Korkola, James E., Bayani, Nora, Samarajiwa, Shamith, Seoane, Jose A., Dane, Mark A., Esch, Amanda, Feiler, Heidi S., Wang, Nicholas J., Hardwicke, Mary Ann, Laquerre, Sylvie, Jackson, Jeff, Wood, Kenneth W., Weber, Barbara, Spellman, Paul T., Aparicio, Samuel, Wooster, Richard, Caldas, Carlos, Gray, Joe W.
Publicado 2017

Fumarate induces vesicular release of mtDNA to drive innate immunity

por Zecchini, Vincent, Paupe, Vincent, Herranz-Montoya, Irene, Janssen, Joëlle, Wortel, Inge M. N., Morris, Jordan L., Ferguson, Ashley, Chowdury, Suvagata Roy, Segarra-Mondejar, Marc, Costa, Ana S. H., Pereira, Gonçalo C., Tronci, Laura, Young, Timothy, Nikitopoulou, Efterpi, Yang, Ming, Bihary, Dóra, Caicci, Federico, Nagashima, Shun, Speed, Alyson, Bokea, Kalliopi, Baig, Zara, Samarajiwa, Shamith, Tran, Maxine, Mitchell, Thomas, Johnson, Mark, Prudent, Julien, Frezza, Christian
Publicado 2023

The renal lineage factor PAX8 controls oncogenic signalling in kidney cancer

por Patel, Saroor A., Hirosue, Shoko, Rodrigues, Paulo, Vojtasova, Erika, Richardson, Emma K., Ge, Jianfeng, Syafruddin, Saiful E., Speed, Alyson, Papachristou, Evangelia K., Baker, David, Clarke, David, Purvis, Stephenie, Wesolowski, Ludovic, Dyas, Anna, Castillon, Leticia, Caraffini, Veronica, Bihary, Dóra, Yong, Cissy, Harrison, David J., Stewart, Grant D., Machiela, Mitchell J., Purdue, Mark P., Chanock, Stephen J., Warren, Anne Y., Samarajiwa, Shamith A., Carroll, Jason S., Vanharanta, Sakari
Publicado 2022

The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups

por Curtis, Christina, Shah, Sohrab P., Chin, Suet-Feung, Turashvili, Gulisa, Rueda, Oscar M., Dunning, Mark J., Speed, Doug, Lynch, Andy G., Samarajiwa, Shamith, Yuan, Yinyin, Gräf, Stefan, Ha, Gavin, Haffari, Gholamreza, Bashashati, Ali, Russell, Roslin, McKinney, Steven, Langerød, Anita, Green, Andrew, Provenzano, Elena, Wishart, Gordon, Pinder, Sarah, Watson, Peter, Markowetz, Florian, Murphy, Leigh, Ellis, Ian, Purushotham, Arnie, Børresen-Dale, Anne-Lise, Brenton, James D., Tavaré, Simon, Caldas, Carlos, Aparicio, Samuel
Publicado 2012

Effects of BRCA2 cis-regulation in normal breast and cancer risk amongst BRCA2 mutation carriers

por Maia, Ana-Teresa, Antoniou, Antonis C, O'Reilly, Martin, Samarajiwa, Shamith, Dunning, Mark, Kartsonaki, Christiana, Chin, Suet-Feung, Curtis, Christina N, McGuffog, Lesley, Domchek, Susan M, Easton, Douglas F, Peock, Susan, Frost, Debra, Evans, D Gareth, Eeles, Ros, Izatt, Louise, Adlard, Julian, Eccles, Diana, Sinilnikova, Olga M, Mazoyer, Sylvie, Stoppa-Lyonnet, Dominique, Gauthier-Villars, Marion, Faivre, Laurence, Venat-Bouvet, Laurence, Delnatte, Capucine, Nevanlinna, Heli, Couch, Fergus J, Godwin, Andrew K, Caligo, Maria Adelaide, Barkardottir, Rosa B, Chen, Xiaoqing, Beesley, Jonathan, Healey, Sue, Caldas, Carlos, Chenevix-Trench, Georgia, Ponder, Bruce AJ
Publicado 2012