Sequence motif finder using memetic algorithm

por Caldonazzo Garbelini, Jader M., Kashiwabara, André Y., Sanches, Danilo S.
Publicado 2018

MathFeature: feature extraction package for DNA, RNA and protein sequences based on mathematical descriptors

por Bonidia, Robson P, Domingues, Douglas S, Sanches, Danilo S, de Carvalho, André C P L F
Publicado 2021

BioAutoML: automated feature engineering and metalearning to predict noncoding RNAs in bacteria

por Bonidia, Robson P, Santos, Anderson P Avila, de Almeida, Breno L S, Stadler, Peter F, da Rocha, Ulisses N, Sanches, Danilo S, de Carvalho, André C P L F
Publicado 2022

Information Theory for Biological Sequence Classification: A Novel Feature Extraction Technique Based on Tsallis Entropy

por Bonidia, Robson P., Avila Santos, Anderson P., de Almeida, Breno L. S., Stadler, Peter F., Nunes da Rocha, Ulisses, Sanches, Danilo S., de Carvalho, André C. P. L. F.
Publicado 2022

CRISPRloci: comprehensive and accurate annotation of CRISPR–Cas systems

por Alkhnbashi, Omer S, Mitrofanov, Alexander, Bonidia, Robson, Raden, Martin, Tran, Van Dinh, Eggenhofer, Florian, Shah, Shiraz A, Öztürk, Ekrem, Padilha, Victor A, Sanches, Danilo S, de Carvalho, André C P L F, Backofen, Rolf
Publicado 2021

Draft Genome Sequence of Brevibacillus brevis LABIM17, a Biotechnologically Important Antimicrobial-Producing Bacterium

por de Medeiros Chagas, Larissa, Teixeira, Gustavo Manoel, Mosela, Mirela, de Oliveira, João Paulo, Nicoletto, Maria Luiza Abreu, Bertê, Rosiana, da Silva, Daniel Vieira, Sanches, Danilo Sipoli, Brancher, Jacques Duílio, Padua, Ulisses Pereira, de Oliveira, Admilton Gonçalves
Publicado 2022

Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10

por Bertê, Rosiana, Teixeira, Gustavo Manoel, de Oliveira, João Paulo, Nicoletto, Maria Luiza Abreu, da Silva, Daniel Vieira, de Godoy, Guilherme Gonçalves, Sanches, Danilo Sipoli, de Resende, Juliano Tadeu Vilela, Pereira, Ulisses de Padua, Nunes da Rocha, Ulisses, de Oliveira, Admilton Gonçalves
Publicado 2022

The AnimalAssociatedMetagenomeDB reveals a bias towards livestock and developed countries and blind spots in functional-potential studies of animal-associated microbiomes

por Avila Santos, Anderson Paulo, Kabiru Nata’ala, Muhammad, Kasmanas, Jonas Coelho, Bartholomäus, Alexander, Keller-Costa, Tina, Jurburg, Stephanie D., Tal, Tamara, Camarinha-Silva, Amélia, Saraiva, João Pedro, Ponce de Leon Ferreira de Carvalho, André Carlos, Stadler, Peter F., Sipoli Sanches, Danilo, Rocha, Ulisses
Publicado 2023

Antifungal activity and genomic characterization of the biocontrol agent Bacillus velezensis CMRP 4489

por Baptista, Julia Pezarini, Teixeira, Gustavo Manoel, de Jesus, Maria Luiza Abreu, Bertê, Rosiana, Higashi, Allan, Mosela, Mirela, da Silva, Daniel Vieira, de Oliveira, João Paulo, Sanches, Danilo Sipoli, Brancher, Jacques Duílio, Balbi-Peña, Maria Isabel, de Padua Pereira, Ulisses, de Oliveira, Admilton Gonçalves
Publicado 2022

MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes

por Nata’ala, Muhammad Kabiru, Avila Santos, Anderson P., Coelho Kasmanas, Jonas, Bartholomäus, Alexander, Saraiva, João Pedro, Godinho Silva, Sandra, Keller-Costa, Tina, Costa, Rodrigo, Gomes, Newton C. M., Ponce de Leon Ferreira de Carvalho, André Carlos, Stadler, Peter F., Sipoli Sanches, Danilo, Nunes da Rocha, Ulisses
Publicado 2022