Species-specific duplications driving the recent expansion of NBS-LRR genes in five Rosaceae species

por Zhong, Yan, Yin, Huan, Sargent, Daniel James, Malnoy, Mickael, Cheng, Zong-Ming (Max)
Publicado 2015

A ddRAD Based Linkage Map of the Cultivated Strawberry, Fragaria xananassa

por Davik, Jahn, Sargent, Daniel James, Brurberg, May Bente, Lien, Sigbjørn, Kent, Matthew, Alsheikh, Muath
Publicado 2015

De novo sequencing and analysis of the transcriptome of two highbush blueberry (Vaccinium corymbosum L.) cultivars ‘Bluecrop’ and ‘Legacy’ at harvest and following post-harvest sto...

por Cárcamo de la Concepción, María, Sargent, Daniel James, Šurbanovski, Nada, Colgan, Richard John, Moretto, Marco
Publicado 2021

Additive QTLs on three chromosomes control flowering time in woodland strawberry (Fragaria vesca L.)

por Samad, Samia, Kurokura, Takeshi, Koskela, Elli, Toivainen, Tuomas, Patel, Vipul, Mouhu, Katriina, Sargent, Daniel James, Hytönen, Timo
Publicado 2017

Major-effect candidate genes identified in cultivated strawberry (Fragaria × ananassa Duch.) for ellagic acid deoxyhexoside and pelargonidin-3-O-malonylglucoside biosynthesis, key...

por Davik, Jahn, Aaby, Kjersti, Buti, Matteo, Alsheikh, Muath, Šurbanovski, Nada, Martens, Stefan, Røen, Dag, Sargent, Daniel James
Publicado 2020

Genotyping-by-sequencing enables linkage mapping in three octoploid cultivated strawberry families

por Vining, Kelly J., Salinas, Natalia, Tennessen, Jacob A., Zurn, Jason D., Sargent, Daniel James, Hancock, James, Bassil, Nahla V.
Publicado 2017

Genetic mapping and identification of a QTL determining tolerance to freezing stress in Fragaria vesca L.

por Davik, Jahn, Wilson, Robert C., Njah, Relindis G., Grini, Paul E., Randall, Stephen K., Alsheik, Muath K., Sargent, Daniel James
Publicado 2021

A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.)

por Davik, Jahn, Røen, Dag, Lysøe, Erik, Buti, Matteo, Rossman, Simeon, Alsheikh, Muath, Aiden, Erez Lieberman, Dudchenko, Olga, Sargent, Daniel James
Publicado 2022

Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin

por Troggio, Michela, Šurbanovski, Nada, Bianco, Luca, Moretto, Marco, Giongo, Lara, Banchi, Elisa, Viola, Roberto, Fernández, Felicdad Fernández, Costa, Fabrizio, Velasco, Riccardo, Cestaro, Alessandro, Sargent, Daniel James
Publicado 2013

Chromosome-scale genome sequence assemblies of the ‘Autumn Bliss’ and ‘Malling Jewel’ cultivars of the highly heterozygous red raspberry (Rubus idaeus L.) derived from long-read Ox...

por Price, R. Jordan, Davik, Jahn, Fernandéz Fernandéz, Felicidad, Bates, Helen J., Lynn, Samantha, Nellist, Charlotte F., Buti, Matteo, Røen, Dag, Šurbanovski, Nada, Alsheikh, Muath, Harrison, Richard J., Sargent, Daniel James
Publicado 2023

Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

por Bianco, Luca, Cestaro, Alessandro, Sargent, Daniel James, Banchi, Elisa, Derdak, Sophia, Di Guardo, Mario, Salvi, Silvio, Jansen, Johannes, Viola, Roberto, Gut, Ivo, Laurens, Francois, Chagné, David, Velasco, Riccardo, van de Weg, Eric, Troggio, Michela
Publicado 2014

Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies

por Jung, Sook, Cestaro, Alessandro, Troggio, Michela, Main, Dorrie, Zheng, Ping, Cho, Ilhyung, Folta, Kevin M, Sosinski, Bryon, Abbott, Albert, Celton, Jean-Marc, Arús, Pere, Shulaev, Vladimir, Verde, Ignazio, Morgante, Michele, Rokhsar, Daniel, Velasco, Riccardo, Sargent, Daniel James
Publicado 2012

The genome sequence and transcriptome of Potentilla micrantha and their comparison to Fragaria vesca (the woodland strawberry)

por Buti, Matteo, Moretto, Marco, Barghini, Elena, Mascagni, Flavia, Natali, Lucia, Brilli, Matteo, Lomsadze, Alexandre, Sonego, Paolo, Giongo, Lara, Alonge, Michael, Velasco, Riccardo, Varotto, Claudio, Šurbanovski, Nada, Borodovsky, Mark, Ward, Judson A, Engelen, Kristof, Cavallini, Andrea, Cestaro, Alessandro, Sargent, Daniel James
Publicado 2017

A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. “Hillquist”)

por Brůna, Tomáš, Aryal, Rishi, Dudchenko, Olga, Sargent, Daniel James, Mead, Daniel, Buti, Matteo, Cavallini, Andrea, Hytönen, Timo, Andrés, Javier, Pham, Melanie, Weisz, David, Mascagni, Flavia, Usai, Gabriele, Natali, Lucia, Bassil, Nahla, Fernandez, Gina E, Lomsadze, Alexandre, Armour, Mitchell, Olukolu, Bode, Poorten, Thomas, Britton, Caitlin, Davik, Jahn, Ashrafi, Hamid, Aiden, Erez Lieberman, Borodovsky, Mark, Worthington, Margaret
Publicado 2022