Digenic inheritance in medical genetics

por Schäffer, Alejandro A
Publicado 2013

Quickly identifying identical and closely related subjects in large databases using genotype data

por Jin, Yumi, Schäffer, Alejandro A., Sherry, Stephen T., Feolo, Michael
Publicado 2017

Characterization of Oncology Clinical Trials Using Germline Genetic Data

por Kammula, Ashwin V., Schäffer, Alejandro A., Rajagopal, Padma Sheila
Publicado 2022

Altered gene expression in excitatory neurons is associated with Alzheimer's disease and its higher incidence in women

por Garcia, A. Xavier, Xu, Jielin, Cheng, Feixiong, Ruppin, Eytan, Schäffer, Alejandro A.
Publicado 2023

Evaluating annotations of an Agilent expression chip suggests that many features cannot be interpreted

por Gertz, E Michael, Sengupta, Kundan, Difilippantonio, Michael J, Ried, Thomas, Schäffer, Alejandro A
Publicado 2009

Distinct Genetic Alterations in Colorectal Cancer

por Ashktorab, Hassan, Schäffer, Alejandro A., Daremipouran, Mohammad, Smoot, Duane T., Lee, Edward, Brim, Hassan
Publicado 2010

GRAF-pop: A Fast Distance-Based Method To Infer Subject Ancestry from Multiple Genotype Datasets Without Principal Components Analysis

por Jin, Yumi, Schaffer, Alejandro A., Feolo, Michael, Holmes, J. Bradley, Kattman, Brandi L.
Publicado 2019

In vitro and in vivo identification of clinically approved drugs that modify ACE2 expression

por Sinha, Sanju, Cheng, Kuoyuan, Schäffer, Alejandro A, Aldape, Kenneth, Schiff, Eyal, Ruppin, Eytan
Publicado 2020

Retrieval accuracy, statistical significance and compositional similarity in protein sequence database searches

por Yu, Yi-Kuo, Gertz, E. Michael, Agarwala, Richa, Schäffer, Alejandro A., Altschul, Stephen F.
Publicado 2006

Composition-based statistics and translated nucleotide searches: Improving the TBLASTN module of BLAST

por Gertz, E Michael, Yu, Yi-Kuo, Agarwala, Richa, Schäffer, Alejandro A, Altschul, Stephen F
Publicado 2006

PSI-BLAST pseudocounts and the minimum description length principle

por Altschul, Stephen F., Gertz, E. Michael, Agarwala, Richa, Schäffer, Alejandro A., Yu, Yi-Kuo
Publicado 2009

Database indexing for production MegaBLAST searches

por Morgulis, Aleksandr, Coulouris, George, Raytselis, Yan, Madden, Thomas L., Agarwala, Richa, Schäffer, Alejandro A.
Publicado 2008

Genome-Wide Changes in Protein Translation Efficiency Are Associated with Autism

por Rogozin, Igor B, Gertz, E Michael, Baranov, Pasha V, Poliakov, Eugenia, Schaffer, Alejandro A
Publicado 2018

Application of dissociation curve analysis to radiation hybrid panel marker scoring: generation of a map of river buffalo (B. bubalis) chromosome 20

por Kochan, Kelli J, Amaral, M Elisabete J, Agarwala, Richa, Schäffer, Alejandro A, Riggs, Penny K
Publicado 2008

PedHunter 2.0 and its usage to characterize the founder structure of the Old Order Amish of Lancaster County

por Lee, Woei-Jyh, Pollin, Toni I, O'Connell, Jeffrey R, Agarwala, Richa, Schäffer, Alejandro A
Publicado 2010

Optimizing cancer immunotherapy response prediction by tumor aneuploidy score and fraction of copy number alterations

por Chang, Tian-Gen, Cao, Yingying, Shulman, Eldad D., Ben-David, Uri, Schäffer, Alejandro A., Ruppin, Eytan
Publicado 2023

Phylogenetic analysis of multiprobe fluorescence in situ hybridization data from tumor cell populations

por Chowdhury, Salim Akhter, Shackney, Stanley E., Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schäffer, Alejandro A., Schwartz, Russell
Publicado 2013

PSEUDOMARKER 2.0: efficient computation of likelihoods using NOMAD

por Gertz, Edward Michael, Hiekkalinna, Tero, Digabel, Sébastien Le, Audet, Charles, Terwilliger, Joseph D, Schäffer, Alejandro A
Publicado 2014

Algorithms to Model Single Gene, Single Chromosome, and Whole Genome Copy Number Changes Jointly in Tumor Phylogenetics

por Chowdhury, Salim Akhter, Shackney, Stanley E., Heselmeyer-Haddad, Kerstin, Ried, Thomas, Schäffer, Alejandro A., Schwartz, Russell
Publicado 2014

Domain enhanced lookup time accelerated BLAST

por Boratyn, Grzegorz M, Schäffer, Alejandro A, Agarwala, Richa, Altschul, Stephen F, Lipman, David J, Madden, Thomas L
Publicado 2012