Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum

por Schäffer, Daniel E., Iyer, Lakshminarayan M., Burroughs, A. Maxwell, Aravind, L.
Publicado 2020

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling

por Burroughs, A. Maxwell, Zhang, Dapeng, Schäffer, Daniel E., Iyer, Lakshminarayan M., Aravind, L.
Publicado 2015

Microbial gene expression analysis of healthy and cancerous esophagus uncovers bacterial biomarkers of clinical outcomes

por Schäffer, Daniel E., Li, Wenrui, Elbasir, Abdurrahman, Altieri, Dario C., Long, Qi, Auslander, Noam
Publicado 2023

Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin

por Kaplow, Irene M., Schäffer, Daniel E., Wirthlin, Morgan E., Lawler, Alyssa J., Brown, Ashley R., Kleyman, Michael, Pfenning, Andreas R.
Publicado 2022

A deep learning approach reveals unexplored landscape of viral expression in cancer

por Elbasir, Abdurrahman, Ye, Ying, Schäffer, Daniel E., Hao, Xue, Wickramasinghe, Jayamanna, Tsingas, Konstantinos, Lieberman, Paul M., Long, Qi, Morris, Quaid, Zhang, Rugang, Schäffer, Alejandro A., Auslander, Noam
Publicado 2023

Patient-provider discordance between global assessments of disease activity in rheumatoid arthritis: a comprehensive clinical evaluation

por Challa, Divya N., Kvrgic, Zoran, Cheville, Andrea L., Crowson, Cynthia S., Bongartz, Tim, Mason, Thomas G., Matteson, Eric L., Michet, Clement J., Persellin, Scott T., Schaffer, Daniel E., Muskardin, Theresa L. Wampler, Wright, Kerry, Davis, John M.
Publicado 2017

Patients with ACPA-positive and ACPA-negative rheumatoid arthritis show different serological autoantibody repertoires and autoantibody associations with disease activity

por Cunningham, Kevin Y., Hur, Benjamin, Gupta, Vinod K., Arment, Courtney A., Wright, Kerry A., Mason, Thomas G., Peterson, Lynne S., Bekele, Delamo I., Schaffer, Daniel E., Bailey, Marissa L., Delger, Kara E., Crowson, Cynthia S., Myasoedova, Elena, Zeng, Hu, Rodriguez, Moses, Weyand, Cornelia M., Davis, John M., Sung, Jaeyun
Publicado 2023