Conserved principles of transcriptional networks controlling metabolic flexibility in archaea

por Schmid, Amy K.
Publicado 2018

An archaeal histone-like protein regulates gene expression in response to salt stress

por Sakrikar, Saaz, Schmid, Amy K
Publicado 2021

Growth-Phase-Specific Modulation of Cell Morphology and Gene Expression by an Archaeal Histone Protein

por Dulmage, Keely A., Todor, Horia, Schmid, Amy K.
Publicado 2015

Two transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon

por Schmid, Amy K., Pan, Min, Sharma, Kriti, Baliga, Nitin S.
Publicado 2011

The RosR transcription factor is required for gene expression dynamics in response to extreme oxidative stress in a hypersaline-adapted archaeon

por Sharma, Kriti, Gillum, Nicholas, Boyd, J Lomax, Schmid, Amy
Publicado 2012

The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications

por Bare, J Christopher, Shannon, Paul T, Schmid, Amy K, Baliga, Nitin S
Publicado 2007

Dynamic Metabolite Profiling in an Archaeon Connects Transcriptional Regulation to Metabolic Consequences

por Todor, Horia, Gooding, Jessica, Ilkayeva, Olga R., Schmid, Amy K.
Publicado 2015

N-Glycosylation Is Important for Halobacterium salinarum Archaellin Expression, Archaellum Assembly and Cell Motility

por Zaretsky, Marianna, Darnell, Cynthia L., Schmid, Amy K., Eichler, Jerry
Publicado 2019

Protein–DNA binding dynamics predict transcriptional response to nutrients in archaea

por Todor, Horia, Sharma, Kriti, Pittman, Adrianne M. C., Schmid, Amy K.
Publicado 2013

Copy number variation is associated with gene expression change in archaea

por Dulmage, Keely A., Darnell, Cynthia L., Vreugdenhil, Angie, Schmid, Amy K.
Publicado 2018

Comparative Analysis of rRNA Removal Methods for RNA-Seq Differential Expression in Halophilic Archaea

por Pastor, Mar Martinez, Sakrikar, Saaz, Rodriguez, Deyra N., Schmid, Amy K.
Publicado 2022

A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability

por Schmid, Amy K, Reiss, David J, Pan, Min, Koide, Tie, Baliga, Nitin S
Publicado 2009

Detecting differential growth of microbial populations with Gaussian process regression

por Tonner, Peter D., Darnell, Cynthia L., Engelhardt, Barbara E., Schmid, Amy K.
Publicado 2017

A Regulatory Hierarchy Controls the Dynamic Transcriptional Response to Extreme Oxidative Stress in Archaea

por Tonner, Peter D., Pittman, Adrianne M. C., Gulli, Jordan G., Sharma, Kriti, Schmid, Amy K.
Publicado 2015

Systematic Discovery of Archaeal Transcription Factor Functions in Regulatory Networks through Quantitative Phenotyping Analysis

por Darnell, Cynthia L., Tonner, Peter D., Gulli, Jordan G., Schmidler, Scott C., Schmid, Amy K.
Publicado 2017

Synergistic Impacts of Organic Acids and pH on Growth of Pseudomonas aeruginosa: A Comparison of Parametric and Bayesian Non-parametric Methods to Model Growth

por Bushell, Francesca M. L., Tonner, Peter D., Jabbari, Sara, Schmid, Amy K., Lund, Peter A.
Publicado 2019

Gene Expression of Haloferax volcanii on Intermediate and Abundant Sources of Fixed Nitrogen

por Hwang, Sungmin, Chavarria, Nikita E., Hackley, Rylee K., Schmid, Amy K., Maupin-Furlow, Julie A.
Publicado 2019

The Hypersaline Archaeal Histones HpyA and HstA Are DNA Binding Proteins That Defy Categorization According to Commonly Used Functional Criteria

por Sakrikar, Saaz, Hackley, Rylee K., Martinez-Pastor, Mar, Darnell, Cynthia L., Vreugdenhil, Angie, Schmid, Amy K.
Publicado 2023

A transcription network of interlocking positive feedback loops maintains intracellular iron balance in archaea

por Martinez-Pastor, Mar, Lancaster, W. Andrew, Tonner, Peter D., Adams, Michael W. W., Schmid, Amy K.
Publicado 2017

Clustering gene expression time series data using an infinite Gaussian process mixture model

por McDowell, Ian C., Manandhar, Dinesh, Vockley, Christopher M., Schmid, Amy K., Reddy, Timothy E., Engelhardt, Barbara E.
Publicado 2018